Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00976 ATGGGAGTTTGTTTGAGCACCAAACCTAAAACTGGGTTAAACTCAAAGCATGTGAGTGCCGAGGCCAAAGATCTCAGCAGTCCAAGTAGTAAAATTACGAAAGATCTCAGTAGCACAATTAGTAAGGTCTCTGAGGTTTCGGTGCCTCTTACTCTTCAGAGTGGAGGTGAGATCTTGTATTCATCCAATCTGAAGAGCTTTAGTTTGACAGAACTTACAGCTGCCACAAGAAATTTCCGTAAGGACAGTGTGCTGGGAGAGGATGGTTTTGGATCAGTTTTTAAGGGCTGGATTGACGATCACTCACTTTCTGCAACCAAACCTGGCACGGGGGTTGTTGTTGCTGTGAAAAGACTTAGCCAGGATAGCTTCCAAGGTCACGGGGAGTGGTTGGATGAAGTAAACTATCTAGGACAGCTTTCTCATCCTCATCTAGTGAAATTAATTGGATATTGCTTTGAAGATAGAGACCGTCTTCTGGTCTATGAATTTATGCCTCGTGGTAGCTTGGAGAATCACTTGTTCATGAGAGGCTCATATTTCCAACCTCTTTCTTGGGGCCTGCGTTTGAAAGTCGCTCTTGGTGCTGCCAAAGGGCTTGCATTTCTTCACAGTGCTGAAACAAAAGTGATATATCGAGATTTCAAGACCTCAAATGTCTTGCTGGATTCAAATTATAATGCAAAGCTTGCTGATTTGGGGCTCTCAAAGGACGCACCTACACGTGACAAAAGTCATGTCTCCACCAGAGTAATGGGAACCTACGGATATGCAGCTCCAGAATATCTAGCCACAGGTCATGTGAGTGGTAAGAGTGATGTCTTCAGTTTTGGAGTTGTGCTGCTAGAACTGTTATCTGGCAGGAGGGCTGTGGACAAGAACAGACCATCAGGACAGCACAATTTGGTGGAATGGGCAAAGCCATACATGGCAAACAAGAGAAAGCTTTTGAGTGTGTTAGATAACCGTCTTGAAGGCCAATATGATATAGATGAGGCTTTTAAGGTAGCTACCCTCTCTCTGCGATGCCTTGCAACAGAATCCAAGTTGAGACCAAACATGCAAGAAGTTGTCACAGATTTGGAGCAGCTGCAGGTTCCCCATGTACATCATAATCGTTCTGTGAATACTTCTCGTGGTCGTAGAAAAAGTGCTGATGATTTAATCCATGGTAGAAGCGTTACAACTTCAGTTTCCCCTCTCTCACATGACATTGCAAATACACGTCCTTGA 1233 0.442 MGVCLSTKPKTGLNSKHVSAEAKDLSSPSSKITKDLSSTISKVSEVSVPLTLQSGGEILYSSNLKSFSLTELTAATRNFRKDSVLGEDGFGSVFKGWIDDHSLSATKPGTGVVVAVKRLSQDSFQGHGEWLDEVNYLGQLSHPHLVKLIGYCFEDRDRLLVYEFMPRGSLENHLFMRGSYFQPLSWGLRLKVALGAAKGLAFLHSAETKVIYRDFKTSNVLLDSNYNAKLADLGLSKDAPTRDKSHVSTRVMGTYGYAAPEYLATGHVSGKSDVFSFGVVLLELLSGRRAVDKNRPSGQHNLVEWAKPYMANKRKLLSVLDNRLEGQYDIDEAFKVATLSLRCLATESKLRPNMQEVVTDLEQLQVPHVHHNRSVNTSRGRRKSADDLIHGRSVTTSVSPLSHDIANTRP* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00976 410 MobiDBLite consensus disorder prediction 368 393 - -
Phac11g00976 410 MobiDBLite consensus disorder prediction 1 28 - -
Phac11g00976 410 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 165 375 - -
Phac11g00976 410 Gene3D Transferase(Phosphotransferase) domain 1 165 385 - -
Phac11g00976 410 Pfam Protein tyrosine and serine/threonine kinase 82 361 IPR001245 GO:0004672|GO:0006468
Phac11g00976 410 MobiDBLite consensus disorder prediction 8 28 - -
Phac11g00976 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Phac11g00976 410 PANTHER OS01G0588500 PROTEIN-RELATED 28 365 - -
Phac11g00976 410 SUPERFAMILY Protein kinase-like (PK-like) 54 361 IPR011009 -
Phac11g00976 410 Gene3D Phosphorylase Kinase; domain 1 56 164 - -
Phac11g00976 410 FunFam Serine/threonine-protein kinase BIK1 47 164 - -
Phac11g00976 410 ProSiteProfiles Protein kinase domain profile. 79 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00976 Phac-Chr11 6289463 6293417 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00976 57 361 Glycoside Hydrolase AT3G07070 47.712 2.80e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac11g00976 PK_Tyr_Ser-Thr 5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00976 - - vun:114169806 698.738