Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00956 ATGGAGCACAACTTTCCCAGAGTTGACCTGTTTGATGAAGAGGAGAGCTTATCATACCTCTCAGACTCACTTGGTTTTGCAACAATGGATCCTCCACTGGAAGACAACGACTTCTCAGAAACAGCCAAGTTCATAAGCCAGATCCTCATGGAAGAGAACGTTCAACAAAATCCATTCTATGACTCGCTCACCTTGCAGGTTACCGAGAAGTCCTTCTATGATACTCTCATTGGTAACATTTCCCCTAATCAACACGCCCTTGTTCTCAGCCCCCAAGTTGAAACCACCACCACCACCTGCAGCAATAACTACAACAGCAGTTTTTTAGATGAAAATTTTCCTTCCCCAGATTCTGTTTCTGTTTCTGCTTCTGCTTTTCAGTTTAACCCCCACATCCTTTCTCAGCCACCTTCAGTTACTGTTAGTCATGGATTCTCAGATTTGGATTCTTCTATTGCCAAACTCTTGGCACAAAATATGTTCAATGATGCTGATTCTGTTTCCCAGTTTAGGAGAGGGTTAGAGGAAGCTACCAAGTTTCTTCCTTCTGGCCCTAAGCTTGTAACTGGTCTGCATTCAAACGGGGAGGAACAGGTCAATACGTTTGGAGATAATTCCTACGGATGGGAGGGTAGGAAGAATCACGAGCGCCAGGAGATAGAAGAAGAAGGGAGAAGAAGTAAGCAATCGGCACTTAGCCTTGTTGATGAGAGTGACATTTCAGATGCTATCGATAGGGTGTTTCTAAGTGTGGAAAACGTGGGTAGTGAACAGAATTCCTTGCAGAATGGAGCAGTGAAAGGTGAGGAGCGAGATGGAGGGAAGGGACGATCAAAGAAACAAGGGACGAAGAAGGAAAGTGTGGATTTGAGGAATGTTCTGCTGATGTGTGCACAATCTGTGTATGCCAATGACAACAGAGCTGCCACTGAATTACTAAAGCAAATTAGGCAACACTCTTCTCCCTTTGGGGATGCATCACAGAGGGTAGCTCACTATTTCGCCAATGGTCTTGAAGCACGGTTGGTTGGGGCTGGTTCAGGCGCTCATGAAATATTTTCTTTTCTGAACTCTAAGAGGATTACTGCTGCTGAGTTCCTGAGGGCATACCAACTTTTTCTATCTTCCACCCCTTTCAAGAAGTTTACATATTTCTTTGCAAATAAAATGATTATGGAAGCAGCTGCAAAATCAGAAACCCTCCATATTATTGATTTTGGCATCCTATATGGTTTCCAGTGGCCAATTCTTATAAAGTTTTTATCAAACAGAGAGGGTGGTCCTCCCAAGCTGAGGATCACAGGGATAGAGTTTCCCCAACCAGGCTTTCGTCCCACTGAAAAAATTGAGGAGACTGGTCACCGTCTTGCTAGCTATTGTAAGCGTTACAAGGTTCCCTTCGAATACCATGCAATAGCATCAAGGAACTGGGAAACCATTCAGGTGGAAGCCCTTAAAATTGAGAGCAATGAGATAGTTGCTGTCAACTGTCACATGAGGTTTGAACATTTACTGGATGAGAGTACTGTTGAATTGAACAGTCCTAGAAATGCAGTCCTACATTTGATCAGGAAGATAAATCCGAATATCTTTACTCAGATCATTATTAATGGATCATTTAGTGCCCCTTTCTTTAACACACGGTTTAGGGAGGCACTATTCCATTATTCTGCTGTTTATGATATGTTTGACACTGTCATACCTCGTGAAAACGATTGGAGGTTGACGATTGAGAGCGAGCTTTTGGGTCGGGAGGTTGTGAATGTTATAGCATGTGAAGGTTCTGACAGGGTTCAGAGACCTGAGACATACAAACAATGGCAAGTTAGGAATACAAGGGCTGGTTTCAAGCAGCTCCCATTGAAGGAGGAATTAATGGCCAAATTTAGGACTAAGTTAAAGGAATATCACAGAGATTTTATCTTCAGTGAAGATAACAATTGGATGATTCAAGGTTGGAAGGGCCGCATTTTTAATGCTTCCACTTGTTGGGTGCCCACATAA 2004 0.4306 MEHNFPRVDLFDEEESLSYLSDSLGFATMDPPLEDNDFSETAKFISQILMEENVQQNPFYDSLTLQVTEKSFYDTLIGNISPNQHALVLSPQVETTTTTCSNNYNSSFLDENFPSPDSVSVSASAFQFNPHILSQPPSVTVSHGFSDLDSSIAKLLAQNMFNDADSVSQFRRGLEEATKFLPSGPKLVTGLHSNGEEQVNTFGDNSYGWEGRKNHERQEIEEEGRRSKQSALSLVDESDISDAIDRVFLSVENVGSEQNSLQNGAVKGEERDGGKGRSKKQGTKKESVDLRNVLLMCAQSVYANDNRAATELLKQIRQHSSPFGDASQRVAHYFANGLEARLVGAGSGAHEIFSFLNSKRITAAEFLRAYQLFLSSTPFKKFTYFFANKMIMEAAAKSETLHIIDFGILYGFQWPILIKFLSNREGGPPKLRITGIEFPQPGFRPTEKIEETGHRLASYCKRYKVPFEYHAIASRNWETIQVEALKIESNEIVAVNCHMRFEHLLDESTVELNSPRNAVLHLIRKINPNIFTQIIINGSFSAPFFNTRFREALFHYSAVYDMFDTVIPRENDWRLTIESELLGREVVNVIACEGSDRVQRPETYKQWQVRNTRAGFKQLPLKEELMAKFRTKLKEYHRDFIFSEDNNWMIQGWKGRIFNASTCWVPT* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00956 667 MobiDBLite consensus disorder prediction 209 232 - -
Phac11g00956 667 Pfam GRAS domain family 290 664 IPR005202 -
Phac11g00956 667 ProSiteProfiles GRAS family profile. 281 665 IPR005202 -
Phac11g00956 667 MobiDBLite consensus disorder prediction 200 233 - -
Phac11g00956 667 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 233 654 IPR005202 -
Phac11g00956 667 MobiDBLite consensus disorder prediction 259 285 - -
Phac11g00956 667 MobiDBLite consensus disorder prediction 268 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00956 Phac-Chr11 6182039 6184561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00956 43 667 GRAS Transcription Factor Family AT1G07530 44.833 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac11g00956 GRAS 4.1e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00956 - - gmx:100795855 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02200 5 41325995 41328212 Phac11g00956 11 6182039 6184561 PCT