Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00955 ATGCTCTCCATGGATTCCCTTTTGGATAATTTTCCAGGTTCTGCAAATGGATTTATATTTGAAAACGGTTCTGACTCGTTGTTTGCGAATCAGAACAGGGCAAGTGTGTTCAAGTTGGATGATTCACGTTCCCCTTCTGAGTCTGCCACTGATTATGCTCCCTCTTCTGGGACAAGCTCTGACGGAGAACACCCAGAGAGTACTAAACACTTCAATCCCATTCTCAGGTACATAAGTGATATCCTTATGGAAGAAGAGGATGATTTGGAGCGCAAACCCTGCATGTTGCAGGATTGTTTGAGACTCCAGGCTGCTGAAAAATCATTCTATGATGCTTTGGTTCGTAGTCACCCATCATCACCTCGTCAATTTAATGATAACCCTGACCCAGATGATAATTTTGGTGGAACCACTAGTTCTGAGAGTTACAGCAGTTATACCACTGACAATTCATGTGACTCTGATTGGTTTAACGGTGCTGGTGATTTTGAGTCTTCTTTCCTGCAAAGATCGCTGCATAATTCTCCGGAACACGCTTATCTTGCTCCTGATCTGATTAGAGAGGCACAAGCTGGGTTCCATTTTTCAAATGGAGCCTGGAAGTTGATTCAGTCGCAGAACAAGGCAGGCGCGATTGAAGAGGGTGTGACGAGGACAGGCAAAGGATCAAGGGAGAAGAGGAGCCATCTCATGAACGATGATGTCTCACATGAAGAAGAGGAGAGAAGCAATAAGCTTTCAGCTGTCTATTCTGATGATTCGGAGCCATCTAGCATGTTCGATGAAGTGCTGCTTTGCAAGGATGGTAAGAGTCCAGCCATTTTTAAGTCTGACCGTGAACCGTCGTCATCACAGATTGCTGATTCGGGAGGATCTAATGGGAAGACAACACGTTCGAAGAAAGGTTCCAACAAGGGAAAAAGTGCAAGAACAACAGTGGATTTATGGACTTTGCTATCTCAATGCGCACAAGCTGTGGCTAGCTTTGACCCGAGGAGTGCAAATGAAATCCTGAAGCAGATTAGGCAGCACTCTTCACCTTTAGGCGATGGACTTCAGCGTCTGGCTCACTACTTTGCCGATGGCCTAGAGACAAGGTTAGCTGCTGGAACACCAAAGTTCATGCTCTTTCAGTCAGCATCTGCTGCAGACATGTTGAAAGCTTACCGAGTGTATGTCACAGCATCACCATTTCACTGGATGTCATATTTCTTGGCTAACCGTACTATTCTGAAGTTATCACAAAGTGAAAGCAGTCTTCACATTATTGACTTTGGGATTAGCTATGGTTTCCAGTGGCCTTGCCTCATCCAAGGGCTTTCAGAGAGAACGGGCGGTCCTCCAAGACTTCGTATAACAGGAATAGATCTTCCTCAGCCAGGATTTAGGCCAGCAGAAAGGGTAGAGGAGACGGGGCGGCGCCTAGAGAAGTACTGCAAGAGGTTTGGGGTCCCGTTTGAGTACAATTGCCTTGCTCAGAAATGGGAAACTATAAGACTTGAGGATCTCAAACTTGATAGGAGTGAAGTTACTGTGGTTAACTGTTTCTACAGATTGAAGAACCTGTCGGATGAAACTGTGACTGCAAACTGTCCAAGGGATGCTGTGCTGAGGTTGATCAGGAGGATCAATCCTACCATCTTCATGCACGGGGTTGTGAATGGCACCTACAATGCACCATTCTTCCTGACAAGGTTCAGGGAAGCACTCTTCCACTTCTCAGCCTTGTACGATATGTTTGAAGCTAATGTGCCTCGGGAAGATCCATCTAGGCTTATGTTTGAGAAAGGGCTGTTTGGAAGGGACGCAATCAATGTCATAGCATGTGAGGGGGCAGAGAGGGTTGAAAGGCCAGAGACCTACAAGCAATGGCAGGTTAGGAACCAGAGAGCAAGGTTCAAGCAACTTCCATTGGCCACAGAGCTCGTGAACAGAGTAAAGGAAATGGTGAAGAAGGAATATCATAAAGATTTTACAGTTGATGAGAATGGCAAGTGGGTTTTGCAAGGATGGAAAGGGCGTATTCTATTTGCTCTTTCTTCTTGGGTTCCTGCTTGA 2058 0.4582 MLSMDSLLDNFPGSANGFIFENGSDSLFANQNRASVFKLDDSRSPSESATDYAPSSGTSSDGEHPESTKHFNPILRYISDILMEEEDDLERKPCMLQDCLRLQAAEKSFYDALVRSHPSSPRQFNDNPDPDDNFGGTTSSESYSSYTTDNSCDSDWFNGAGDFESSFLQRSLHNSPEHAYLAPDLIREAQAGFHFSNGAWKLIQSQNKAGAIEEGVTRTGKGSREKRSHLMNDDVSHEEEERSNKLSAVYSDDSEPSSMFDEVLLCKDGKSPAIFKSDREPSSSQIADSGGSNGKTTRSKKGSNKGKSARTTVDLWTLLSQCAQAVASFDPRSANEILKQIRQHSSPLGDGLQRLAHYFADGLETRLAAGTPKFMLFQSASAADMLKAYRVYVTASPFHWMSYFLANRTILKLSQSESSLHIIDFGISYGFQWPCLIQGLSERTGGPPRLRITGIDLPQPGFRPAERVEETGRRLEKYCKRFGVPFEYNCLAQKWETIRLEDLKLDRSEVTVVNCFYRLKNLSDETVTANCPRDAVLRLIRRINPTIFMHGVVNGTYNAPFFLTRFREALFHFSALYDMFEANVPREDPSRLMFEKGLFGRDAINVIACEGAERVERPETYKQWQVRNQRARFKQLPLATELVNRVKEMVKKEYHKDFTVDENGKWVLQGWKGRILFALSSWVPA* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00955 685 ProSiteProfiles GRAS family profile. 306 683 IPR005202 -
Phac11g00955 685 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 247 677 IPR005202 -
Phac11g00955 685 MobiDBLite consensus disorder prediction 116 146 - -
Phac11g00955 685 MobiDBLite consensus disorder prediction 218 248 - -
Phac11g00955 685 MobiDBLite consensus disorder prediction 39 69 - -
Phac11g00955 685 MobiDBLite consensus disorder prediction 277 299 - -
Phac11g00955 685 MobiDBLite consensus disorder prediction 39 62 - -
Phac11g00955 685 MobiDBLite consensus disorder prediction 213 255 - -
Phac11g00955 685 MobiDBLite consensus disorder prediction 274 308 - -
Phac11g00955 685 MobiDBLite consensus disorder prediction 118 146 - -
Phac11g00955 685 Pfam GRAS domain family 317 682 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00955 Phac-Chr11 6168702 6171530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00955 226 685 GRAS Transcription Factor Family AT1G07530 55.889 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac11g00955 GRAS 5.8e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00955 - - gmx:100815586 1141.72