Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00947 ATGATATTAAACTCCCCTCAGATGTTACATCATTTTTTGCTGTGGGTTGTACTGGCTATCTTTGTAATGGCTACAAGTCTGAGGATGTATGCAACTTGTCAACAGCTTCAAGCACAGGCTAGGGCTCATGCTGCAGCAGCCTCTGGGTTGCTTGGCCATACTGAACTCCGTCTTCACATGCCACCATCGATTGCAATTGCAACTAGAGGAAGATTGCAGGGTCTTAGACTTCAGCTTGCACTTCTTGACCGTGAATTTGATGAGCTAGATTATGATACTTTGAGAGCTCTGGACACTGATACTGCTCCTAGTACTCGTTCAATGACTGAGGAAGAGATAAATGCCTTGCCTATTCATACTTATAAAGTTCCAGTCCCACCAAAAGATGGCTCAGCTGGTCTGGCATCCTCTTCAGGTGCAGCCGAGATTAAGCAAGAATCTGGAGGAACAGAGGCAGGTATCGGAGGTCCAGAAGATGAGCTGACATGTACTATATGCCTGGACCAAGTTAAGAGGGGGGAGCTTGTTCGTAGCTTACCATGCTTGCATCAGTTTCATGCCAACTGCATTGATCCATGGCTCCGGCAACAAGGGACATGTCCTGTGTGCAAATTAAGGATAGGGTCGGGAAGTGGGGGAAGCAGGGAGAGCGAATCCGATGGTTCAGATATTGCGTGA 678 0.4735 MILNSPQMLHHFLLWVVLAIFVMATSLRMYATCQQLQAQARAHAAAASGLLGHTELRLHMPPSIAIATRGRLQGLRLQLALLDREFDELDYDTLRALDTDTAPSTRSMTEEEINALPIHTYKVPVPPKDGSAGLASSSGAAEIKQESGGTEAGIGGPEDELTCTICLDQVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKLRIGSGSGGSRESESDGSDIA* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00947 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 210 IPR013083 -
Phac11g00947 225 MobiDBLite consensus disorder prediction 127 155 - -
Phac11g00947 225 ProSiteProfiles Zinc finger RING-type profile. 163 204 IPR001841 -
Phac11g00947 225 PANTHER TARGET OF ERK KINASE MPK-1 1 209 - -
Phac11g00947 225 SMART ring_2 163 203 IPR001841 -
Phac11g00947 225 CDD RING-H2_PA-TM-RING 162 204 - -
Phac11g00947 225 Pfam Ring finger domain 162 204 IPR001841 -
Phac11g00947 225 SUPERFAMILY RING/U-box 158 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00947 Phac-Chr11 6131296 6135591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00947 1 225 C3H Transcription Factor Family AT3G55530 67.401 1.25e-95 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00947 K16283 - gmx:100805406 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00947 11 6131296 6135591 Phac11g00947 11 6131296 6135591 ECH