Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00941 ATGGGGGAAGAGGTGAAGACGAGCGAGTACGACGAAGAGCGCGTAATGGAGTGGGAGGTGGGTCTCCCCACTGCCAACGATCTCACGCCTCTCTCTCAGCCGCTGATTCCGCCGGAGCTTGCCAACGCCTTCAGCATATCGCCGGAGCCCCACCGCACCACCCTAGACGTCAACCGCGCCTCCCGCAACACGCTCTCTACGATCCGCGGCGGCGGGAGCGTGCACCAGGCCTTCTCCTCCTCCAACAATCACCACCACGAGGAGGAGGAGGAGGACGACGACGAGGACACCGATCGCGACGGCTCGGGGTCCGATTCCCGGAAGCATCGGAAGATCGAGTGCGTGGCGGAGGAGGCGGACTCGGCTGTGCGGACGGAGAACTCGGCGGAGCGGACGGCGGTGAAGCGGCCGCGGCTGGTGTGGACCCCGCAGCTGCACAAGCGGTTCGTGGACGTGGTAGCGCACCTTGGGATCAAGAACGCGGTGCCGAAGACGATTATGCAGTTGATGAACGTGGAAGGGTTGACCCGGGAGAATGTGGCGAGCCATCTTCAGAAGTATCGGCTTTACCTGAAGCGGATGCAGGGTCTCTCCAACGAAGGTCCTTCTTCATCGGATCAGTTATTTGCTTCCACACCTGTGCCTCAGAGTTTGCACGACTCAGCTCCTCCCAGTGCCCATTCCCATGGTCACTCCCATGGCCATGCCAGTGCTCATCTCCCTGTTCCCATGATGTCCATGCCCTATCCCCCTCCCATGATGTCCATGCCTGTCCTCGGCATGCCCCATGCCCATGGCCACATGGGCATCACTATGCCTACTTCTTCCGCCACCTCAGCTTACCATCCTTACAACATGCTGCACCAAAGGGATTGGACTCACCTTGCTCCCAGTGATAAATGA 903 0.6058 MGEEVKTSEYDEERVMEWEVGLPTANDLTPLSQPLIPPELANAFSISPEPHRTTLDVNRASRNTLSTIRGGGSVHQAFSSSNNHHHEEEEEDDDEDTDRDGSGSDSRKHRKIECVAEEADSAVRTENSAERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHDSAPPSAHSHGHSHGHASAHLPVPMMSMPYPPPMMSMPVLGMPHAHGHMGITMPTSSATSAYHPYNMLHQRDWTHLAPSDK* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00941 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 192 IPR017930 -
Phac11g00941 300 MobiDBLite consensus disorder prediction 65 80 - -
Phac11g00941 300 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 13 270 IPR044841 GO:0003700|GO:0006355
Phac11g00941 300 MobiDBLite consensus disorder prediction 65 111 - -
Phac11g00941 300 Pfam Myb-like DNA-binding domain 140 188 IPR001005 -
Phac11g00941 300 SUPERFAMILY Homeodomain-like 134 193 IPR009057 -
Phac11g00941 300 Gene3D - 132 195 - -
Phac11g00941 300 FunFam Two-component response regulator 132 195 - -
Phac11g00941 300 NCBIfam myb-like DNA-binding domain, SHAQKYF class 137 189 IPR006447 GO:0003677
Phac11g00941 300 MobiDBLite consensus disorder prediction 197 239 - -
Phac11g00941 300 MobiDBLite consensus disorder prediction 197 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00941 Phac-Chr11 6066328 6069138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00941 1 220 G2-like Transcription Factor Family AT3G46640 61.570 1.15e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac11g00941 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00941 - - aprc:113858844 478.018