Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00934 ATGGAATCTGATCATGATCACCAAGCAGCAATATCTGAAAATCCCTCTGATGGGGAGGACCAAGGTGCAACTCACGTGACATCCAGGTCCTACGAGTGCAACTTCTGCAGGAGGGGCTTCTCCAATGCACAAGCACTGGGGGGACACATGAACATCCACAGGAAAGACAAAGCCAAGCTCAAGCAACAACAATCTTCAAATCAAACTCAAGTTCAACCATCTTTGGACAAGGTTGTCCCTCCACAGGATCAGACCAAGTCTGGTGAAGAACGCAACGCACCAAAATGGAATTGGAATGTGTCTCAAGAAGAACATGTACTCTCTTCTGGAGCCACTCACACAAGGCAGCTTCCACTCTTTGAAGAATCACCAACTAGCAGTGAAACACTAAACCCACAAGGTCAAAATACCACTGAAGGAGCTTTGTTATCTACCCGAGATTCATCATTGGAGTTAGACCTTGAACTCAGACTGGGACCTGAACCACAGGATTCATCAGCAGAAACGGGTACAAGAAATTTTTTTTGA 528 0.4583 MESDHDHQAAISENPSDGEDQGATHVTSRSYECNFCRRGFSNAQALGGHMNIHRKDKAKLKQQQSSNQTQVQPSLDKVVPPQDQTKSGEERNAPKWNWNVSQEEHVLSSGATHTRQLPLFEESPTSSETLNPQGQNTTEGALLSTRDSSLELDLELRLGPEPQDSSAETGTRNFF* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00934 175 PANTHER OS07G0101800 PROTEIN 10 162 - -
Phac11g00934 175 Gene3D Classic Zinc Finger 18 92 - -
Phac11g00934 175 SUPERFAMILY beta-beta-alpha zinc fingers 28 58 IPR036236 -
Phac11g00934 175 ProSiteProfiles Zinc finger C2H2 type domain profile. 31 58 IPR013087 -
Phac11g00934 175 MobiDBLite consensus disorder prediction 1 27 - -
Phac11g00934 175 ProSitePatterns Zinc finger C2H2 type domain signature. 33 53 IPR013087 -
Phac11g00934 175 MobiDBLite consensus disorder prediction 55 175 - -
Phac11g00934 175 MobiDBLite consensus disorder prediction 62 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00934 Phac-Chr11 6011873 6012400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00934 10 63 C2H2 Transcription Factor Family AT3G09290 62.963 1.02e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac11g00934 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00934 - - vun:114170729 266.929