Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00919 ATGGGAGCTCGTTGCTCTAAATTCTCTCTCTGCTGGTGGCCTTCCCACGTCAAATCAAACCTCCATGATTTGTCTGATAATGATGATGATGGGAAGAGGAATGAGAAGGATCCTTGGGGAGGGTTCAGTGAGTACAGTTTGGATCAGCTGAGAGTTGCCACCTCAGGATTCTCACCAGACAACATTGTCTCGGAACATGGTGAGAAAGCTCCAAATGTTGTCTACAAAGGGATGCTTGAGGATGATAGGTTGGTTGCTGTGAAGCGCTTCAATAAGTCTGCTTGGCCTGATTCTCGACAATTCCTAGAGGAGGCACGTGCTGTGGGGCAGCTGAGGAATGAGAGATTGGCTAACTTGGTTGGGTGTTGCTGTGAGGGAGAAGAGAGATTGCTTGTTGCAGAGTTCATGCCCAATGAAACTCTCTCTAAACACCTTTTTCATTGGGAAGCCCAGCCTATGAAATGGGCAATGAGGCTGAGGGTGGCCTTATATTTAGCTCAAGCTTTGGAATACTGCAGCAGTAAAGGAAGGGCATTGTACCATGATCTTAATGCTTATAGAATTTTATTTGATCAGGAAGGCAACCCTAGACTCTCTTGTTTTGGACTCATGAAAAACAGTAGGGATGGCAGAAGCTATAGTACAAATTTAGCCTTCACGCCTCCAGAGTACTTGAGGACAGGAAGAATCACCGCTGAAAGTGTGGTTTACAGTTTTGGCACCCTATTACTTGATCTTCTGAGTGGAAAGCATATCCCACCGAGTCATGCACTTGACCTTATCCGAGGCAAAAATTTTCTGTTGCTGATGGACTCGTGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGTTAGTGAGGTTAGCGTCGCGTTGTTTACAATATGAACCTCGTGAGAGACCAAATGTTAAGTCGCTTGTGACTGCTCTGACCCCTCTTCAGAAAGAAACTTCGCAGGTACCGTCATATGTTTTAATGGGCATACCAGATCGAAGTCTGTCATCAAAGGAAACAGTTTCATTAACACCTTTTGGTGACGCTTGTTCCAGAAGAGATCTCACTGCAGTACATGAGATTTTGGATAAAGTGGGCTATAAGGATGATGAAGATGTTGCAAATGAGCTTTCCTTCCAAATGTGGACAAATCAAATACAAGACACTCTAAATTCGAAGAAGCAAGGCGATTCTGCTTTCCATGCTAGAGACTTCTCCACAGCCATTGACTGCTATACACAATTCATTGATGGTGGAACCATGGTATCACCTACCGTGTATGCCAGACGCTGCTTATGCTATCTGATGAATGACATGGCACAAGAAGCACTTGGAGATGCCATGCAAGCTCAATCTATATCTTCTACCTGGCCCACTGCATACTATCTTCAAGCAGCTGCTCTCTTCAGCCTTGGCATGGACAATGATGCACAGGAAAGTCTTAAAGATGGAACAACACTGGAAACCAGGAAGTATAGAAACTGA 1482 0.4447 MGARCSKFSLCWWPSHVKSNLHDLSDNDDDGKRNEKDPWGGFSEYSLDQLRVATSGFSPDNIVSEHGEKAPNVVYKGMLEDDRLVAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPNETLSKHLFHWEAQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQEGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLLLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNVKSLVTALTPLQKETSQVPSYVLMGIPDRSLSSKETVSLTPFGDACSRRDLTAVHEILDKVGYKDDEDVANELSFQMWTNQIQDTLNSKKQGDSAFHARDFSTAIDCYTQFIDGGTMVSPTVYARRCLCYLMNDMAQEALGDAMQAQSISSTWPTAYYLQAAALFSLGMDNDAQESLKDGTTLETRKYRN* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00919 493 Pfam Protein tyrosine and serine/threonine kinase 74 311 IPR001245 GO:0004672|GO:0006468
Phac11g00919 493 Gene3D Phosphorylase Kinase; domain 1 31 135 - -
Phac11g00919 493 SUPERFAMILY Protein kinase-like (PK-like) 39 317 IPR011009 -
Phac11g00919 493 FunFam probable serine/threonine-protein kinase At4g35230 386 493 - -
Phac11g00919 493 SUPERFAMILY TPR-like 391 489 IPR011990 GO:0005515
Phac11g00919 493 FunFam probable serine/threonine-protein kinase At4g35230 32 135 - -
Phac11g00919 493 FunFam probable serine/threonine-protein kinase At5g41260 137 329 - -
Phac11g00919 493 ProSiteProfiles Protein kinase domain profile. 60 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00919 493 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 11 492 IPR045845 GO:0004672|GO:0009742
Phac11g00919 493 Gene3D Tetratricopeptide repeat domain 387 492 IPR011990 GO:0005515
Phac11g00919 493 Gene3D Transferase(Phosphotransferase) domain 1 137 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00919 Phac-Chr11 5913749 5918012 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00919 45 311 Glycoside Hydrolase AT3G07070 34.576 4.86e-40 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Phac11g00919 PK_Tyr_Ser-Thr 4.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00919 - - gmx:732542 951.814