Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00893 ATGACCAATTCCTACAGATCCAATGACCTTAACTTTTGGTTGGACCTCAATTCACCATGTCTTCTCTCTTCTCCTTCTGCATCAACTCCTCCCATCAATCCATCATTCTATTTTCCTTCCAATTATCATACCTACACCACTGTCATATCTTCTACTCAGTTCGAATCCTCTCCTCCTCAAACAAAAGCCCTTCCTTTCCTTCATCTAAGACATCAAGAAGAAGAAGCACAGTATCTTCAATCTTCATTCAGTGCCATGGAAGTGGACAAGAAAAAGGAAGAGCTAAGTACATCCAAGTGCTTGGATGAAGAGGATGCTGTCACTGTGGCTTTACACTTAGGGCTTCCAAGCACTAGTGCATCTGCTGATTCAGCTTCAAGCCTATACTCAGCAGAGGTTTCAGACAAAGAAGAAAAAATCACTGATGCTTCGGGGCTACTGTCAGATAGAATTAACAAAGGACAATATTGGATCCCTACTTCTGCTCAGATTCTGATTGGTCCAACACAGTTCGCGTGCCCTCTTTGTTTCAAGACGTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCTCAATATAGAAAGGGACCAGAATCTCTAAGGGGAACACAACCAACAGCTATGCTAAGGCTCCCTTGCTATTGCTGTGCTCCAGGATGCAAGAACAACATCGACCATCCGAGAGCAAAACCACTCAAAGACTTTAGAACCCTTCAAACACATTACAAGAGAAAGCATGGGACAAAGCCTTTCGTGTGCAGAAAATGTTGCAAAACGTTTGCTGTGAGGGGTGATTGGAGAACTCACGAGAAGAACTGTGGGAAACGCTGGTATTGCTCTTGTGGGTCTGATTTCAAGCACAAAAGATCTCTTAAAGATCATATCAAGGCATTTGGATATGGACACACGGCTCATGGAAATGACTGCATGAACCTTGACCAAGATGATGATCAAGCAGGCTCTGAAATCGAACAAGAAAATTAA 996 0.4307 MTNSYRSNDLNFWLDLNSPCLLSSPSASTPPINPSFYFPSNYHTYTTVISSTQFESSPPQTKALPFLHLRHQEEEAQYLQSSFSAMEVDKKKEELSTSKCLDEEDAVTVALHLGLPSTSASADSASSLYSAEVSDKEEKITDASGLLSDRINKGQYWIPTSAQILIGPTQFACPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGTKPFVCRKCCKTFAVRGDWRTHEKNCGKRWYCSCGSDFKHKRSLKDHIKAFGYGHTAHGNDCMNLDQDDDQAGSEIEQEN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00893 331 ProSitePatterns Zinc finger C2H2 type domain signature. 173 193 IPR013087 -
Phac11g00893 331 SUPERFAMILY beta-beta-alpha zinc fingers 237 275 IPR036236 -
Phac11g00893 331 Gene3D Classic Zinc Finger 232 308 - -
Phac11g00893 331 FunFam Zinc finger protein WIP2 224 306 - -
Phac11g00893 331 ProSiteProfiles Zinc finger C2H2 type domain profile. 171 198 IPR013087 -
Phac11g00893 331 PANTHER ZINC FINGER PROTEIN WIP2 41 330 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00893 Phac-Chr11 5758639 5761383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00893 43 329 C2H2 Transcription Factor Family AT1G51220 59.868 1.11e-120 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac11g00893 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00893 - - gmx:100802239 558.91