Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00888 ATGGACCATGACAAGACTGGGTGCCAAGCTCCTCCCGAAGGTCCTATACTGTGCATCAACAACTGTGGTTTTTTTGGAAGTGCAGCTACCATGAATATGTGTTCTAAATGCCACAAAGACATGTTACTTAAACAGGAGCAGGCAAAGCTTGCAGCATCGTCCATTGGGAATATTATGAATGGGTCATCTAGCAGCACTGAAAATGAACCTGTTGTTGCTGCTGCTAATGTTGAAATCCCAGTTATTTCAGTAGAGCCAAAAACTTTCTCTGTGCAACCTTTATTTGGTTCAGTTTCAGAGGGGAGTGAGGAGGCAAAGCCGAAGGACGGTCCAAAACGTTGCATCAGCTGCAATAAGCGAGTTGGTTTGACAGGGTTTAATTGTCGATGTGGCAATCTTTTTTGTGCTGTACATCGCTATTCAGACAAGCATAATTGCCCGTTTGATTACCGCACTGCTGCTCGGGATGCCATAGCTAAAGCAAACCCAGTTGTCAAGGCTGAGAAGCTTGATAAGATCTAA 522 0.4444 MDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMLLKQEQAKLAASSIGNIMNGSSSSTENEPVVAAANVEIPVISVEPKTFSVQPLFGSVSEGSEEAKPKDGPKRCISCNKRVGLTGFNCRCGNLFCAVHRYSDKHNCPFDYRTAARDAIAKANPVVKAEKLDKI* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00888 173 ProSiteProfiles Zinc finger AN1-type profile. 108 154 IPR000058 GO:0008270
Phac11g00888 173 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Phac11g00888 173 FunFam Zinc finger AN1-type containing 6 90 169 - -
Phac11g00888 173 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Phac11g00888 173 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Phac11g00888 173 SUPERFAMILY AN1-like Zinc finger 100 168 IPR035896 -
Phac11g00888 173 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 173 - -
Phac11g00888 173 SMART AN1_Zf_4 114 151 IPR000058 GO:0008270
Phac11g00888 173 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Phac11g00888 173 Gene3D - 96 169 IPR035896 -
Phac11g00888 173 Gene3D - 4 70 - -
Phac11g00888 173 Pfam AN1-like Zinc finger 116 150 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00888 Phac-Chr11 5700438 5703324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00888 8 173 C2H2 Transcription Factor Family AT3G52800 42.690 2.00e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00888 - - gmx:100499857 330.487