Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00827 ATGGATGAAACTGCCGGAAAAAGTTCTTCTCTTCCCTCGTCTAAGTTAGATGCCTCAAAACAACTCTTTGAGGCTCGTGATAAGAAATCTAATAGCAAGGAAACACTGTTAGTTATGGAAGAACTTCCTGCCAAATTAGATACTGTCGGGGAAGTTATTGAAGACAGCAAGAATAGTTTATCTTTGACTAGTTCAATTACATCTTCAGCAGATGATTTTGTAGGGAACGACAATGAAGGTGAGAAAGAGTATTTCACTGTTGACGAGTATGCAATTGAAGATAATGAAGATATTAATGAAAGTGAGTCTTCAGAGGCTGTGCCTTCTGACTCATCACCTCATCTTCAGCCATCTCAAACAGTTGAAAAGGATATAATGATGGTTCACATGCTTCGCCTTGTTTGTGCTTCTAAAGGATCATTGGCTGACTGTTTGCCACAAGTGATAACAGAGTTGTACAATTTAGGGATCATTTCTGATTTAGCACGTGATATGGCATCTAAACCACCTTCCATTTTCAACAAAACCTTTGATCGTGTTTTCCAGAAACAGCTGGCTTCATCCGGAATATCTCAATTTTGGAAGCCTGATCTTGGAGGCTCAAAAACAGTTCCCCACAGTTCTCGATATTTGAATGATTTTGAGGAGCTGCGTTCTCTTGGTCAAGGTGGTTTTGGTCATGTTGTATTGTGCAAAAATAAACTTGATGGAAGGCAATATGCAGTAAAGAAAATTCGCCTTAAGGACAAAAGCATGCCTGACCGAATATTAAGGGAAGTAGCTACACTTTCTCGTTTACAGCATCAACATGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGAGTTTCTGATTCTTATGGTGATTCTGCTTGGGGTTCAAAGACTACTGTGAGCTCTACTTTCAGCTTTATGGCTGCAACTTCCAATGATATCTTTGGGCATGAAAATCAGCTTGAATCAACTTACCTTTATATACAAATGGAATACTGTCCCAGGACTCTTCGCCAGGTGTTTGAATCATATAATCATTTTGACAAAGAACTGGCTTGGCATTTGTTTCGTCAAATAGTGGAAGGCTTGGCACACATACATGGACAAGGAATAATTCACCGGGACTTAACACCGAATAACATATTCTTTGATGCTCGCAATGATATTAAAATTGGTGATTTTGGTCTTGCCAAGTTCTTGAAGTTAGAGCAGCTGGATCAAGATCTGGGCCACCCTGCTGATGCAACTGGAGTTTCCATTGATGGCACTGGACAAGTGGGGACATATTTCTATACAGCTCCTGAAATTGAGCAAGGATGGCCCAAGATTGATGAAAAGGCTGATATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCACCCATTTGGGACAGCAATGGAGAGACATGTTGTTTTATCTGATTTGAAACAGAAAGGGGAAGTTCCACCAATTTGGGTTGCTGAGTTTCCAGAACAGGAATCCTTACTGAGGCAGTTAATGTCTCTGGCTCCTTCTGATCGCCCTTCTGCCACAGAACTTCTGCAAAATGCATTCCCGCAGCGAATGGAGTCTGAATTATTGGATGATATCCTGAGAACAATGCAGAAATCAGAAGATACAAGCATATATGATAAAGTTTTAAGTGCTATCTTTGACGAAGAAATGCTAAGCACAAAACACATTCGTCAGGTTGGTAGATTGGGGTCAGTTGGAGACAGCAGTTCACCCATTCAGTACACAGAATTCGAAACAGAGGTTCGGGATTATGTTGTAGATACAAACAGGGAAATTTTCAGACAGCATTGTGCAAAGCACCTAGAAATATCAACAATGAGATTATTGGAAGATTGTCCACAGTTTAATAGAAATGCAGTTAAACTTCTGACACATGGAGGAGACATGCTTGAACTTTGCCACGAGTTGCGTTTTCCTTTTGTGAACTGGATTATATCTAACCAGAAATCTTCATTCAAACGATATGAGATATCATGTGTCTTTAGAAGAGCAGTTGGACATTCACCACCAAATCGCTACCTTCAGGGAGATTTTGACATTATTGGTGGCACCTCGGCATTGACAGAAGCAGAGGTCATAAAGGTCACAAGGGACGTAGTCACTTGTTTTTTTCATGCAGATTTATGTGACATTCATCTCAACCATGGTGACCTTCTGGATGCAATTTGGTCATGGATAGGAGTCAAGGTAGAACACAGACTCAAAGTAGCAGAGCTTCTTTCAATGATGGGTTCTTTGCGCCCACAATCCTCAGAAAGGAAATCAAAATGGGTCGTGATAAGGCGGCAGCTTTTGCAGGAACTGAATTTAGCAGAGGCTATGGTAAATAGGTTACAGACTGTAGGTTTAAGGTTTTGTGGATCTGCAGATCATGCACTCCCTCGATTAAGAGGAGCTCTTCCATCTGATAAACGTACATTCAAGGCACTTGATGAGTTGTCTGAGCTTGTCAGTCTCCTGAGGATTTGGAGGATTGACAAAAATATATATATAGATGCATTAATGCCACCAACTGAAAGTTATCATAGAGATTTGTTTTTTCAGGTATACTTAAGGAAAGAGAATGGTCCTGGATCTCTCTCTGAAGGTGCCTTGCTGGCTGTTGGTGGTCGATATGACTACTTGCTTCATCAGCTGTGGAAAAGTGACTGTAAAGGAAATCCTCCTACTGGAGTGGGGACTAGCCTTGCACTGGAGACAATAATTCAGAATTGTCCTGTAGATATCAAGCCCAATAGAAACGAAGTCAGCACCAATATTCTTGTCTGTTCTAGAGGCGGAGGTGGTCTCCTGGTGGAGCGCATGGAGCTAGTTGCGGAATTATGGGAGGAGAACTTTAAGGCTGAATTCGTTCCTACCCCTGATCCAAGTCTTACAGAGCAGTATGAGTATGCTAATGAACATGGTATCAAATGCCTTGTCATCATTGCAGATACAGATTTTTCCTTGACAGATTCTGTTAAGGTTCGACACCTTGAACTTAAGAGGGAGAAAAGTGTGGAGAGAAAAAGCCTAGTTAAGTTTCTATCAGATGCCATGGCAACACAATTTAGAAATCCCTCCATTTGGATTTGA 3087 0.4108 MDETAGKSSSLPSSKLDASKQLFEARDKKSNSKETLLVMEELPAKLDTVGEVIEDSKNSLSLTSSITSSADDFVGNDNEGEKEYFTVDEYAIEDNEDINESESSEAVPSDSSPHLQPSQTVEKDIMMVHMLRLVCASKGSLADCLPQVITELYNLGIISDLARDMASKPPSIFNKTFDRVFQKQLASSGISQFWKPDLGGSKTVPHSSRYLNDFEELRSLGQGGFGHVVLCKNKLDGRQYAVKKIRLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETGVSDSYGDSAWGSKTTVSSTFSFMAATSNDIFGHENQLESTYLYIQMEYCPRTLRQVFESYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDLGHPADATGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKQKGEVPPIWVAEFPEQESLLRQLMSLAPSDRPSATELLQNAFPQRMESELLDDILRTMQKSEDTSIYDKVLSAIFDEEMLSTKHIRQVGRLGSVGDSSSPIQYTEFETEVRDYVVDTNREIFRQHCAKHLEISTMRLLEDCPQFNRNAVKLLTHGGDMLELCHELRFPFVNWIISNQKSSFKRYEISCVFRRAVGHSPPNRYLQGDFDIIGGTSALTEAEVIKVTRDVVTCFFHADLCDIHLNHGDLLDAIWSWIGVKVEHRLKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELNLAEAMVNRLQTVGLRFCGSADHALPRLRGALPSDKRTFKALDELSELVSLLRIWRIDKNIYIDALMPPTESYHRDLFFQVYLRKENGPGSLSEGALLAVGGRYDYLLHQLWKSDCKGNPPTGVGTSLALETIIQNCPVDIKPNRNEVSTNILVCSRGGGGLLVERMELVAELWEENFKAEFVPTPDPSLTEQYEYANEHGIKCLVIIADTDFSLTDSVKVRHLELKREKSVERKSLVKFLSDAMATQFRNPSIWI* 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00827 1028 Gene3D Phosphorylase Kinase; domain 1 202 330 - -
Phac11g00827 1028 CDD STKc_EIF2AK4_GCN2_rpt2 207 514 - -
Phac11g00827 1028 FunFam eIF-2-alpha kinase GCN2 576 912 - -
Phac11g00827 1028 Gene3D Transferase(Phosphotransferase) domain 1 333 527 - -
Phac11g00827 1028 ProSitePatterns Tyrosine protein kinases specific active-site signature. 369 381 IPR008266 GO:0004672|GO:0006468
Phac11g00827 1028 Gene3D Bira Bifunctional Protein; Domain 2 577 913 IPR045864 -
Phac11g00827 1028 MobiDBLite consensus disorder prediction 97 117 - -
Phac11g00827 1028 SUPERFAMILY Protein kinase-like (PK-like) 210 542 IPR011009 -
Phac11g00827 1028 PANTHER HISTIDYL-TRNA SYNTHETASE 574 1022 - -
Phac11g00827 1028 SUPERFAMILY Class II aaRS and biotin synthetases 580 907 IPR045864 -
Phac11g00827 1028 ProSiteProfiles Protein kinase domain profile. 214 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00827 1028 MobiDBLite consensus disorder prediction 1 34 - -
Phac11g00827 1028 Pfam Histidyl-tRNA synthetase 664 905 IPR041715 -
Phac11g00827 1028 ProSitePatterns Protein kinases ATP-binding region signature. 220 244 IPR017441 GO:0005524
Phac11g00827 1028 FunFam Histidine--tRNA ligase, cytoplasmic 919 1018 - -
Phac11g00827 1028 SUPERFAMILY Class II aaRS ABD-related 924 1018 - -
Phac11g00827 1028 Pfam Protein kinase domain 214 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00827 1028 FunFam eIF-2-alpha kinase GCN2 202 330 - -
Phac11g00827 1028 MobiDBLite consensus disorder prediction 1 17 - -
Phac11g00827 1028 Coils Coil 765 785 - -
Phac11g00827 1028 Gene3D - 919 1018 IPR036621 -
Phac11g00827 1028 FunFam eIF-2-alpha kinase GCN2 334 527 - -
Phac11g00827 1028 Pfam Anticodon binding domain of tRNAs 923 1020 IPR024435 -
Phac11g00827 1028 MobiDBLite consensus disorder prediction 20 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00827 Phac-Chr11 5239944 5259325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00827 214 517 MAP Kinase Kinase Kinase AT1G63700 25.321 3.88e-22 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Phac11g00827 Pkinase 5.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00827 K16196 - gmx:100797996 1836.23