Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00826 ATGAATGAAGCCACCAAGGTATTTCTCATCTCTGACCACTCTAGCTATATAAACCAAATTCTCGCCACCTTTGTCACTATTCATTCGTTGTTCAATCGTTTTCGAAACCCAAAACCCTCTTCTTCAACGTCCTCATTGAAACCAAATAGGATTCAGCTGAGAATGGGGCACAGTTCGAAGAAGAAGAAGCGCGGTGGCGGGAGCGGTCGCCGGAGCAAGGGGAGGACGCAGTCCAAAGAACACGCTTCTCAATTTGGCGCCGAGGATTACGACCAGCTCTCCGAAGAGATGACTGCATTATGTGCTATATTCCAAGAAGACTGCAAGATTCTTCCAGGATCGCCTCCTCGTATAGTTATTAAGCTCAGGCCTTACTCAAAGGACATGGGTTATGAGGACCTAGATGTTTCTGCTGCTCTTGTTGTCAGGTGCTTGCCTGGGTATCCTTTCAAGTGCCCCAAGCTGCAGATTATACCAGAGAAAGGGTTATCAGAAGCTGATGCTGATAAGCTTTTGTCTCTCCTCCATGATCAGGCTACTCTAAATGCTAGGGAAGGACGAGTAATGATCTATAATTTGGTTGAGGCTGCTCAAGAATTTCTTTCTGGTATTGAGCCAATTGCCATATCAAATGATTCTAAGCTTCTACACTCAACTATGGAAAGCAATGAAGAATTGTTTACCAAGGATAAGACATCTTTAAGTAAGAAAGGTTCTTTTGTTTATGGTTTTATAGATCTTTTCAGTGGCTATGGAGAAACATGGAGTTGGGGTTTTGGAATGGATGAAACTGCCGGAAAAAGTTCTTCTCTTCCCTCGTCTAAGTTAGATGCCTCAAAACAACTCTTTGAGGCTCGTGATAAGAAATCTAATAGCAAGGAAACACTGTTAGTTATGGAAGAACTTCCTGCCAAATTAGATACTGTCGGGGAAGTTATTGAAGACAGCAAGAATAGTTTATCTTTGACTAGTTCAATTACATCTTCAGCAGATGATTTTGTAGGGAACGACAATGAAGGTGAGAAAGAGTATTTCACTGTTGACGAGTATGCAATTGAAGATAATGAAGATATTAATGAAAGTGAGTCTTCAGAGGCTGTGCCTTCTGACTCATCACCTCATCTTCAGCCATCTCAAACAGTTGAAAAGGATATAATGATGGTTCACATGCTTCGCCTTGTTTGTGCTTCTAAAGGATCATTGGCTGACTGTTTGCCACAAGTGATAACAGAGTTGTACAATTTAGGGATCATTTCTGATTTAGCACGTGATATGGCATCTAAACCACCTTCCATTTTCAACAAAACCTTTGATCGTGTTTTCCAGAAACAGCTGGCTTCATCCGGAATATCTCAATTTTGGAAGCCTGATCTTGGAGGCTCAAAAACAGTTCCCCACAGTTCTCGATATTTGAATGATTTTGAGGAGCTGCGTTCTCTTGGTCAAGGTGGTTTTGGTCATGTTGTATTGTGCAAAAATAAACTTGATGGAAGGCAATATGCAGTAAAGAAAATTCGCCTTAAGGACAAAAGCATGCCTGACCGAATATTAAGGGAAGTAGCTACACTTTCTCGTTTACAGCATCAACATGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGAGTTTCTGATTCTTATGGTGATTCTGCTTGGGGTTCAAAGACTACTGTGAGCTCTACTTTCAGCTTTATGGCTGCAACTTCCAATGATATCTTTGGGCATGAAAATCAGCTTGAATCAACTTACCTTTATATACAAATGGAATACTGTCCCAGGACTCTTCGCCAGGTGTTTGAATCATATAATCATTTTGACAAAGAACTGGCTTGGCATTTGTTTCGTCAAATAGTGGAAGGCTTGGCACACATACATGGACAAGGAATAATTCACCGGGACTTAACACCGAATAACATATTCTTTGATGCTCGCAATGATATTAAAATTGGTGATTTTGGTCTTGCCAAGTTCTTGAAGTTAGAGCAGCTGGATCAAGATCTGGGCCACCCTGCTGATGCAACTGGAGTTTCCATTGATGGCACTGGACAAGTGGGGACATATTTCTATACAGCTCCTGAAATTGAGCAAGGATGGCCCAAGATTGATGAAAAGGCTGATATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCACCCATTTGGGACAGCAATGGAGAGACATGTTGTTTTATCTGATTTGAAACAGAAAGGGGAAGTTCCACCAATTTGGGTTGCTGAGTTTCCAGAACAGGAATCCTTACTGAGGCAGTTAATGTCTCTGGCTCCTTCTGATCGCCCTTCTGCCACAGAACTTCTGCAAAATGCATTCCCGCAGCGAATGGAGTCTGAATTATTGGATGATATCCTGAGAACAATGCAGAAATCAGAAGATACAAGCATATATGATAAAGTTTTAAGTGCTATCTTTGACGAAGAAATGCTAAGCACAAAACACATTCGTCAGGTTGGTAGATTGGGGTCAGTTGGAGACAGCAGTTCACCCATTCAGTACACAGAATTCGAAACAGAGGTTCGGGATTATGTTGTAGATACAAACAGGGAAATTTTCAGACAGCATTGTGCAAAGCACCTAGAAATATCAACAATGAGATTATTGGAAGATTGTCCACAGTTTAATAGAAATGCAGTTAAACTTCTGACACATGGAGGAGACATGCTTGAACTTTGCCACGAGTTGCGTTTTCCTTTTGTGAACTGGATTATATCTAACCAGAAATCTTCATTCAAACGATATGAGATATCATGTGTCTTTAGAAGAGCAGTTGGACATTCACCACCAAATCGCTACCTTCAGGGAGATTTTGACATTATTGGTGGCACCTCGGCATTGACAGAAGCAGAGGTCATAAAGGTCACAAGGGACGTAGTCACTTGTTTTTTTCATGCAGATTTATGTGACATTCATCTCAACCATGGTGACCTTCTGGATGCAATTTGGTCATGGATAGGAGTCAAGGTAGAACACAGACTCAAAGTAGCAGAGCTTCTTTCAATGATGGGTTCTTTGCGCCCACAATCCTCAGAAAGGAAATCAAAATGGGTCGTGATAAGGCGGCAGCTTTTGCAGGAACTGAATTTAGCAGAGGCTATGGTAAATAGGTTACAGACTGTAGGTTTAAGGTTTTGTGGATCTGCAGATCATGCACTCCCTCGATTAAGAGGAGCTCTTCCATCTGATAAACGTACATTCAAGGCACTTGATGAGTTGTCTGAGCTTGTCAGTCTCCTGAGGATTTGGAGGATTGACAAAAATATATATATAGATGCATTAATGCCACCAACTGAAAGTTATCATAGAGATTTGTTTTTTCAGGTATACTTAAGGAAAGAGAATGGTCCTGGATCTCTCTCTGAAGGTGCCTTGCTGGCTGTTGGTGGTCGATATGACTACTTGCTTCATCAGCTGTGGAAAAGTGACTGTAAAGGAAATCCTCCTACTGGAGTGGGGACTAGCCTTGCACTGGAGACAATAATTCAGAATTGTCCTGTAGATATCAAGCCCAATAGAAACGAAGTCAGCACCAATATTCTTGTCTGTTCTAGAGGCGGAGGTGGTCTCCTGGTGGAGCGCATGGAGCTAGTTGCGGAATTATGGGAGGAGAACTTTAAGGCTGAATTCGTTCCTACCCCTGATCCAAGTCTTACAGAGCAGTATGAGTATGCTAATGAACATGGTATCAAATGCCTTGTCATCATTGCAGATACAGATTTTTCCTTGACAGATTCTGTTAAGGTTCGACACCTTGAACTTAAGAGGGAGAAAAGTGTGGAGAGAAAAAGCCTAGTTAAGTTTCTATCAGATGCCATGGCAACACAATTTAGAAATCCCTCCATTTGGATTTGA 3867 0.4161 MNEATKVFLISDHSSYINQILATFVTIHSLFNRFRNPKPSSSTSSLKPNRIQLRMGHSSKKKKRGGGSGRRSKGRTQSKEHASQFGAEDYDQLSEEMTALCAIFQEDCKILPGSPPRIVIKLRPYSKDMGYEDLDVSAALVVRCLPGYPFKCPKLQIIPEKGLSEADADKLLSLLHDQATLNAREGRVMIYNLVEAAQEFLSGIEPIAISNDSKLLHSTMESNEELFTKDKTSLSKKGSFVYGFIDLFSGYGETWSWGFGMDETAGKSSSLPSSKLDASKQLFEARDKKSNSKETLLVMEELPAKLDTVGEVIEDSKNSLSLTSSITSSADDFVGNDNEGEKEYFTVDEYAIEDNEDINESESSEAVPSDSSPHLQPSQTVEKDIMMVHMLRLVCASKGSLADCLPQVITELYNLGIISDLARDMASKPPSIFNKTFDRVFQKQLASSGISQFWKPDLGGSKTVPHSSRYLNDFEELRSLGQGGFGHVVLCKNKLDGRQYAVKKIRLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETGVSDSYGDSAWGSKTTVSSTFSFMAATSNDIFGHENQLESTYLYIQMEYCPRTLRQVFESYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDLGHPADATGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKQKGEVPPIWVAEFPEQESLLRQLMSLAPSDRPSATELLQNAFPQRMESELLDDILRTMQKSEDTSIYDKVLSAIFDEEMLSTKHIRQVGRLGSVGDSSSPIQYTEFETEVRDYVVDTNREIFRQHCAKHLEISTMRLLEDCPQFNRNAVKLLTHGGDMLELCHELRFPFVNWIISNQKSSFKRYEISCVFRRAVGHSPPNRYLQGDFDIIGGTSALTEAEVIKVTRDVVTCFFHADLCDIHLNHGDLLDAIWSWIGVKVEHRLKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELNLAEAMVNRLQTVGLRFCGSADHALPRLRGALPSDKRTFKALDELSELVSLLRIWRIDKNIYIDALMPPTESYHRDLFFQVYLRKENGPGSLSEGALLAVGGRYDYLLHQLWKSDCKGNPPTGVGTSLALETIIQNCPVDIKPNRNEVSTNILVCSRGGGGLLVERMELVAELWEENFKAEFVPTPDPSLTEQYEYANEHGIKCLVIIADTDFSLTDSVKVRHLELKREKSVERKSLVKFLSDAMATQFRNPSIWI* 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00826 1288 PANTHER HISTIDYL-TRNA SYNTHETASE 834 1282 - -
Phac11g00826 1288 SMART RWD2001b 95 204 IPR006575 GO:0005515
Phac11g00826 1288 SUPERFAMILY UBC-like 90 201 IPR016135 -
Phac11g00826 1288 FunFam eIF-2-alpha kinase GCN2 836 1172 - -
Phac11g00826 1288 ProSiteProfiles Protein kinase domain profile. 474 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00826 1288 FunFam Histidine--tRNA ligase, cytoplasmic 1179 1278 - -
Phac11g00826 1288 FunFam eIF-2-alpha kinase GCN2 462 590 - -
Phac11g00826 1288 ProSitePatterns Protein kinases ATP-binding region signature. 480 504 IPR017441 GO:0005524
Phac11g00826 1288 Coils Coil 1025 1045 - -
Phac11g00826 1288 Gene3D - 1179 1278 IPR036621 -
Phac11g00826 1288 Gene3D Ubiquitin Conjugating Enzyme 82 207 IPR016135 -
Phac11g00826 1288 Gene3D Bira Bifunctional Protein; Domain 2 837 1173 IPR045864 -
Phac11g00826 1288 Pfam RWD domain 92 201 IPR006575 GO:0005515
Phac11g00826 1288 FunFam eIF-2-alpha kinase GCN2 84 210 - -
Phac11g00826 1288 SUPERFAMILY Protein kinase-like (PK-like) 470 801 IPR011009 -
Phac11g00826 1288 MobiDBLite consensus disorder prediction 54 70 - -
Phac11g00826 1288 Pfam Histidyl-tRNA synthetase 925 1165 IPR041715 -
Phac11g00826 1288 SUPERFAMILY Class II aaRS ABD-related 1184 1278 - -
Phac11g00826 1288 ProSiteProfiles RWD domain profile. 95 204 IPR006575 GO:0005515
Phac11g00826 1288 MobiDBLite consensus disorder prediction 357 377 - -
Phac11g00826 1288 SUPERFAMILY Class II aaRS and biotin synthetases 840 1167 IPR045864 -
Phac11g00826 1288 MobiDBLite consensus disorder prediction 37 87 - -
Phac11g00826 1288 MobiDBLite consensus disorder prediction 37 52 - -
Phac11g00826 1288 ProSitePatterns Tyrosine protein kinases specific active-site signature. 629 641 IPR008266 GO:0004672|GO:0006468
Phac11g00826 1288 Pfam Anticodon binding domain of tRNAs 1183 1280 IPR024435 -
Phac11g00826 1288 Pfam Protein kinase domain 474 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00826 1288 FunFam eIF-2-alpha kinase GCN2 594 787 - -
Phac11g00826 1288 Gene3D Transferase(Phosphotransferase) domain 1 593 787 - -
Phac11g00826 1288 CDD STKc_EIF2AK4_GCN2_rpt2 467 774 - -
Phac11g00826 1288 Gene3D Phosphorylase Kinase; domain 1 462 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00826 Phac-Chr11 5239944 5259325 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00826 474 777 MAP Kinase Kinase Kinase AT1G63700 25.321 3.95e-22 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Phac11g00826 Pkinase 8.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00826 K16196 - gmx:100797996 2182.53