Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00825 ATGAAGTATTTCACTGTTGACGAGTATGCAATTGAAGATAATGAAGATATTAATGAAAGTGAGTCTTCAGAGGCTGTGCCTTCTGACTCATCACCTCATCTTCAGCCATCTCAAACAGTTGAAAAGGATATAATGATGGTTCACATGCTTCGCCTTGTTTGTGCTTCTAAAGGATCATTGGCTGACTGTTTGCCACAAGTGATAACAGAGTTGTACAATTTAGGGATCATTTCTGATTTAGCACGTGATATGGCATCTAAACCACCTTCCATTTTCAACAAAACCTTTGATCGTGTTTTCCAGAAACAGCTGGCTTCATCCGGAATATCTCAATTTTGGAAGCCTGATCTTGGAGGCTCAAAAACAGTTCCCCACAGTTCTCGATATTTGAATGATTTTGAGGAGCTGCGTTCTCTTGGTCAAGGTGGTTTTGGTCATGTTGTATTGTGCAAAAATAAACTTGATGGAAGGCAATATGCAGTAAAGAAAATTCGCCTTAAGGACAAAAGCATGCCTGACCGAATATTAAGGGAAGTAGCTACACTTTCTCGTTTACAGCATCAACATGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGAGTTTCTGATTCTTATGGTGATTCTGCTTGGGGTTCAAAGACTACTGTGAGCTCTACTTTCAGCTTTATGGCTGCAACTTCCAATGATATCTTTGGGCATGAAAATCAGCTTGAATCAACTTACCTTTATATACAAATGGAATACTGTCCCAGGACTCTTCGCCAGGTGTTTGAATCATATAATCATTTTGACAAAGAACTGGCTTGGCATTTGTTTCGTCAAATAGTGGAAGGCTTGGCACACATACATGGACAAGGAATAATTCACCGGGACTTAACACCGAATAACATATTCTTTGATGCTCGCAATGATATTAAAATTGGTGATTTTGGTCTTGCCAAGTTCTTGAAGTTAGAGCAGCTGGATCAAGATCTGGGCCACCCTGCTGATGCAACTGGAGTTTCCATTGATGGCACTGGACAAGTGGGGACATATTTCTATACAGCTCCTGAAATTGAGCAAGGATGGCCCAAGATTGATGAAAAGGCTGATATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCACCCATTTGGGACAGCAATGGAGAGACATGTTGTTTTATCTGATTTGAAACAGAAAGGGGAAGTTCCACCAATTTGGGTTGCTGAGTTTCCAGAACAGGAATCCTTACTGAGGCAGTTAATGTCTCTGGCTCCTTCTGATCGCCCTTCTGCCACAGAACTTCTGCAAAATGCATTCCCGCAGCGAATGGAGTCTGAATTATTGGATGATATCCTGAGAACAATGCAGAAATCAGAAGATACAAGCATATATGATAAAGTTTTAAGTGCTATCTTTGACGAAGAAATGCTAAGCACAAAACACATTCGTCAGGTTGGTAGATTGGGGTCAGTTGGAGACAGCAGTTCACCCATTCAGTACACAGAATTCGAAACAGAGGTTCGGGATTATGTTGTAGATACAAACAGGGAAATTTTCAGACAGCATTGTGCAAAGCACCTAGAAATATCAACAATGAGATTATTGGAAGATTGTCCACAGTTTAATAGAAATGCAGTTAAACTTCTGACACATGGAGGAGACATGCTTGAACTTTGCCACGAGTTGCGTTTTCCTTTTGTGAACTGGATTATATCTAACCAGAAATCTTCATTCAAACGATATGAGATATCATGTGTCTTTAGAAGAGCAGTTGGACATTCACCACCAAATCGCTACCTTCAGGGAGATTTTGACATTATTGGTGGCACCTCGGCATTGACAGAAGCAGAGGTCATAAAGGTCACAAGGGACGTAGTCACTTGTTTTTTTCATGCAGATTTATGTGACATTCATCTCAACCATGGTGACCTTCTGGATGCAATTTGGTCATGGATAGGAGTCAAGGTAGAACACAGACTCAAAGTAGCAGAGCTTCTTTCAATGATGGGTTCTTTGCGCCCACAATCCTCAGAAAGGAAATCAAAATGGGTCGTGATAAGGCGGCAGCTTTTGCAGGAACTGAATTTAGCAGAGGCTATGGTAAATAGGTTACAGACTGTAGGTTTAAGGTTTTGTGGATCTGCAGATCATGCACTCCCTCGATTAAGAGGAGCTCTTCCATCTGATAAACGTACATTCAAGGCACTTGATGAGTTGTCTGAGCTTGTCAGTCTCCTGAGGATTTGGAGGATTGACAAAAATATATATATAGATGCATTAATGCCACCAACTGAAAGTTATCATAGAGATTTGTTTTTTCAGGTATACTTAAGGAAAGAGAATGGTCCTGGATCTCTCTCTGAAGGTGCCTTGCTGGCTGTTGGTGGTCGATATGACTACTTGCTTCATCAGCTGTGGAAAAGTGACTGTAAAGGAAATCCTCCTACTGGAGTGGGGACTAGCCTTGCACTGGAGACAATAATTCAGAATTGTCCTGTAGATATCAAGCCCAATAGAAACGAAGTCAGCACCAATATTCTTGTCTGTTCTAGAGGCGGAGGTGGTCTCCTGGTGGAGCGCATGGAGCTAGTTGCGGAATTATGGGAGGAGAACTTTAAGGCTGAATTCGTTCCTACCCCTGATCCAAGTCTTACAGAGCAGTATGAGTATGCTAATGAACATGGTATCAAATGCCTTGTCATCATTGCAGATACAGATTTTTCCTTGACAGATTCTGTTAAGGTTCGACACCTTGAACTTAAGAGGGAGAAAAGTGTGGAGAGAAAAAGCCTAGTTAAGTTTCTATCAGATGCCATGGCAACACAATTTAGAAATCCCTCCATTTGGATTTGA 2844 0.4128 MKYFTVDEYAIEDNEDINESESSEAVPSDSSPHLQPSQTVEKDIMMVHMLRLVCASKGSLADCLPQVITELYNLGIISDLARDMASKPPSIFNKTFDRVFQKQLASSGISQFWKPDLGGSKTVPHSSRYLNDFEELRSLGQGGFGHVVLCKNKLDGRQYAVKKIRLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETGVSDSYGDSAWGSKTTVSSTFSFMAATSNDIFGHENQLESTYLYIQMEYCPRTLRQVFESYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDLGHPADATGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKQKGEVPPIWVAEFPEQESLLRQLMSLAPSDRPSATELLQNAFPQRMESELLDDILRTMQKSEDTSIYDKVLSAIFDEEMLSTKHIRQVGRLGSVGDSSSPIQYTEFETEVRDYVVDTNREIFRQHCAKHLEISTMRLLEDCPQFNRNAVKLLTHGGDMLELCHELRFPFVNWIISNQKSSFKRYEISCVFRRAVGHSPPNRYLQGDFDIIGGTSALTEAEVIKVTRDVVTCFFHADLCDIHLNHGDLLDAIWSWIGVKVEHRLKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELNLAEAMVNRLQTVGLRFCGSADHALPRLRGALPSDKRTFKALDELSELVSLLRIWRIDKNIYIDALMPPTESYHRDLFFQVYLRKENGPGSLSEGALLAVGGRYDYLLHQLWKSDCKGNPPTGVGTSLALETIIQNCPVDIKPNRNEVSTNILVCSRGGGGLLVERMELVAELWEENFKAEFVPTPDPSLTEQYEYANEHGIKCLVIIADTDFSLTDSVKVRHLELKREKSVERKSLVKFLSDAMATQFRNPSIWI* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00825 947 Gene3D Transferase(Phosphotransferase) domain 1 252 447 - -
Phac11g00825 947 Gene3D - 838 937 IPR036621 -
Phac11g00825 947 PANTHER HISTIDYL-TRNA SYNTHETASE 494 941 - -
Phac11g00825 947 Gene3D Bira Bifunctional Protein; Domain 2 496 832 IPR045864 -
Phac11g00825 947 ProSitePatterns Tyrosine protein kinases specific active-site signature. 288 300 IPR008266 GO:0004672|GO:0006468
Phac11g00825 947 MobiDBLite consensus disorder prediction 15 36 - -
Phac11g00825 947 ProSitePatterns Protein kinases ATP-binding region signature. 139 163 IPR017441 GO:0005524
Phac11g00825 947 FunFam Histidine--tRNA ligase, cytoplasmic 838 937 - -
Phac11g00825 947 SUPERFAMILY Protein kinase-like (PK-like) 129 461 IPR011009 -
Phac11g00825 947 Pfam Histidyl-tRNA synthetase 583 824 IPR041715 -
Phac11g00825 947 SUPERFAMILY Class II aaRS and biotin synthetases 499 826 IPR045864 -
Phac11g00825 947 CDD STKc_EIF2AK4_GCN2_rpt2 126 433 - -
Phac11g00825 947 Pfam Anticodon binding domain of tRNAs 842 939 IPR024435 -
Phac11g00825 947 Gene3D Phosphorylase Kinase; domain 1 121 249 - -
Phac11g00825 947 FunFam eIF-2-alpha kinase GCN2 495 831 - -
Phac11g00825 947 SUPERFAMILY Class II aaRS ABD-related 843 937 - -
Phac11g00825 947 Coils Coil 684 704 - -
Phac11g00825 947 FunFam eIF-2-alpha kinase GCN2 121 249 - -
Phac11g00825 947 Pfam Protein kinase domain 133 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00825 947 ProSiteProfiles Protein kinase domain profile. 133 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00825 947 FunFam eIF-2-alpha kinase GCN2 253 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00825 Phac-Chr11 5239944 5259325 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00825 133 436 MAP Kinase Kinase Kinase AT1G63700 25.321 5.24e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Phac11g00825 Pkinase 4.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00825 K16196 - gmx:100797996 1743.4