Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00766 ATGCAAAATGGTTGGCCACAATTTCTGAATGACAACTCAGTGATGCTTGATGATTTCTTGCTCTTTACATATCATGGAGGAAACTGCTTCCATGTTCAAATCTTTGGTAAGAATGGATTGGAGAGGCTGTGTTTCAAACAAACAAGACAAGATCAAGTTCTGATTCCAAGTTTGGTGAGGACAAAGAAGAGCACACAGAGAAGAACTTTTGCCAGTTCATTCCTCCACCAAGCCAAGTCTTGTAAAAAAGGTCTGTCTTTCAGCAACAAAATCTCATTTTCTAAGGACTTCCAAAAGCTCAAGAGCTCAATTAAGATTGAAAGCACAGAAGCCTGCAACTTGGCAGACTCTTTTACCTCTCGCAATCCTCATTGGAAGCATCTCATGACAAAATGCAATGTAGAAGATCACTGCACATTGCCAATTGCCACGGAGTTTGCCAGGAAGCATATTCCTGAAGCAGTGAAACAGATCATTCTTTGGAACACAGAAGGAAAATTTTGGGAAGTGGTGGTGACTTGGTTTGGATGTCAGAATAAGAGGGAAGGCATTGTCGTTTTATTCTTAATAAGGAGAGCTATAGATGGAGGTGGCGTAGCTGTGTTTGTTTCCACAAGACACTCAAGTTGCTTCTATGCTCCACAGCTCAACTCTGTCAACTGCTTGATGACTAGTGGTGCCAAGAAATACCCTCAGTTCTTCAAAATCTTCCTTCCAGAGCAAGATTCTCACATAATGAAGGTTCCAAAGGAGTTTTTGAAGCACTTGGATGAAGACTTGTCGAGTAATGCTGTTCTTAGTGGCCCTTCTTCTGGTGAGCAGTGGCAAGTAAGTGTTCTGAAGAAAGGAAATGATGTGTATATGCAAAATGGTTGGCCAGAATTTGTGACAGACAACTTAGTAGTGCTTAATGAGTTCTTGCTTTTCACATATCATGGAGACAACTGCTTCCATGTTCAAACTTTTGGTAAGAATGGATTGGAGAGGTTATGCCTCAGAGAAACAAGACAAGAACAAGCTGCTGCCATCCCAAAGAAGAGTACACAAACTTTTGCAGATACACCTTTCAGCAACAAAGGCTTCGTTTTTACTGGATGTGAGACAATGGAAACAAGACAAAAACAAACTGCCACCCCAAGTTTGTCAAGAACAAAGAAGAACAAAGAAAGGAAGTTTTCTCCGGGTGCATCACACCTCCATGAATCGAAGTCTTATCAACAAGATTTGTCCTTCAGCAACAAAGCCTCTTTTTCGAAGGACTTCCCAACTCCTCAGCATTCAATTGAAATTGAAAGTTCGGAAGCATGGAAATTGGCTGAGTCCTTTACCTCTTGCAATCCTCATTGGAAGCACCTCATGACAAAATCTAATGTGGAAGATTGTTGCATATTGCCTATTGCTACTGAGTTTGCTAGAAAGTATATTCCTGAAGCAGTGAAACAGATCCACATTGAAAATTGTAAAGGAAAATCTTGGAAAGTGCAAGTGAATTGTTTCAAAAATCAAGATAGAAGATATGCTCAGTTAACAAAAGGATGGGTAAATTTCGTTCGTGATAACAAGCTCATGAGAGGTGACACTTGCATATTTGAACTTGAAGAAGACTTCCATTTGAGGGTTCACATATTCAGAACCAGATGTGCACCACGTTAA 1653 0.4035 MQNGWPQFLNDNSVMLDDFLLFTYHGGNCFHVQIFGKNGLERLCFKQTRQDQVLIPSLVRTKKSTQRRTFASSFLHQAKSCKKGLSFSNKISFSKDFQKLKSSIKIESTEACNLADSFTSRNPHWKHLMTKCNVEDHCTLPIATEFARKHIPEAVKQIILWNTEGKFWEVVVTWFGCQNKREGIVVLFLIRRAIDGGGVAVFVSTRHSSCFYAPQLNSVNCLMTSGAKKYPQFFKIFLPEQDSHIMKVPKEFLKHLDEDLSSNAVLSGPSSGEQWQVSVLKKGNDVYMQNGWPEFVTDNLVVLNEFLLFTYHGDNCFHVQTFGKNGLERLCLRETRQEQAAAIPKKSTQTFADTPFSNKGFVFTGCETMETRQKQTATPSLSRTKKNKERKFSPGASHLHESKSYQQDLSFSNKASFSKDFPTPQHSIEIESSEAWKLAESFTSCNPHWKHLMTKSNVEDCCILPIATEFARKYIPEAVKQIHIENCKGKSWKVQVNCFKNQDRRYAQLTKGWVNFVRDNKLMRGDTCIFELEEDFHLRVHIFRTRCAPR* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00766 550 Pfam B3 DNA binding domain 452 545 IPR003340 GO:0003677
Phac11g00766 550 Pfam B3 DNA binding domain 233 324 IPR003340 GO:0003677
Phac11g00766 550 MobiDBLite consensus disorder prediction 383 397 - -
Phac11g00766 550 SMART B3_2 233 325 IPR003340 GO:0003677
Phac11g00766 550 SMART B3_2 449 546 IPR003340 GO:0003677
Phac11g00766 550 ProSiteProfiles B3 DNA-binding domain profile. 231 325 IPR003340 GO:0003677
Phac11g00766 550 SUPERFAMILY DNA-binding pseudobarrel domain 445 548 IPR015300 -
Phac11g00766 550 CDD B3_DNA 231 322 IPR003340 GO:0003677
Phac11g00766 550 PANTHER B3 DOMAIN-CONTAINING 1 178 - -
Phac11g00766 550 Gene3D - 224 326 IPR015300 -
Phac11g00766 550 Gene3D - 1 39 IPR015300 -
Phac11g00766 550 CDD B3_DNA 453 544 IPR003340 GO:0003677
Phac11g00766 550 SUPERFAMILY DNA-binding pseudobarrel domain 229 326 IPR015300 -
Phac11g00766 550 ProSiteProfiles B3 DNA-binding domain profile. 1 38 IPR003340 GO:0003677
Phac11g00766 550 SUPERFAMILY DNA-binding pseudobarrel domain 2 39 IPR015300 -
Phac11g00766 550 Gene3D - 428 546 IPR015300 -
Phac11g00766 550 Gene3D - 104 202 IPR015300 -
Phac11g00766 550 ProSiteProfiles B3 DNA-binding domain profile. 449 546 IPR003340 GO:0003677
Phac11g00766 550 SUPERFAMILY DNA-binding pseudobarrel domain 120 178 IPR015300 -
Phac11g00766 550 MobiDBLite consensus disorder prediction 370 401 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00766 246 545 B3 DNA Binding Superfamily AT3G18990 25.915 2.71e-26 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac11g00766 B3 9.1e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00766 - - pvu:PHAVU_011G050700g 642.499