Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00765 ATGCGATGTAGTAATGAAGGGCCTCACTTTGCAAATCTTCTTAAATTTTTTGAAGAAATGGATGATGAAGATTCTATTGAAATCTTGGATTCATCACCATCCCATCTTGTTCCCAGTTCATTGCAAAATAAAGTTCTTGCTGGATCAGTAGATAAAATGTCGCCTGCAAAGTGTTATACACCTCCAGCATTGCAGAATCTGTTCAATGGATCTAAACTTAATAGCATAAACTGGGGAGAGGGTAGTGATGCGCATTGTTCGAAAAGTGCCAATTCCCTGGATAATCGATTGACAAGAGACATAGGTGTTCAATTTAATGCAGTTGAGTTTAAAAGATCTACTGAAGAATTGAAATTGCGTGCTTCCATGGAGGAAAGGATGAAAAAAACTGCAAGAAAGAAGCGGAAATCAGAGGGACTGGAAGCCTCTGCTGAACAAGAAGAGGAAGTTGAAATGCGCTTTAGATTTTATGAAAGTGCTTCTGCAAGAAAAAGAACCGTGACAGCAGAAGAAAGAGAGAGGGCCATCAATGCAGCAAAAGCATTTGAACCACCTAATCCTTTCTGTCGGGTTGTCCTAAGGCCCTCCTATCTATACAGAGGATGTATAATGTATCTGCCATCCTGTTTTGCAGAAAAACATTTGAATGGAGTTTCGGGGTTTATTAAACTTCAGATCTCTAATGGGAGACAGTGGCCAGTTCGCTGCCTGTATAGGGGAGGTAGAGCCAAGTTAAGCCAGGGGTGGTTTGAATTTTCATTAGAGAACAATTTAGGAGAAGGTGATGTGTGTGTGTTTGAGCTTCTTAGAATGAAAGAAGTAGTGCTGCAAGTTAGCATCTTTCGCATTACTGAGGATGTGGGATTGTTGAGCCCTCCTCCTTTGCAGCAGAATCAAAAGATGAGCTCAGCTAAACTGCTGAACACTCCCTTGCAGCAACACCTTACTTCAACTAAAATGATTAGAAATTAG 972 0.4074 MRCSNEGPHFANLLKFFEEMDDEDSIEILDSSPSHLVPSSLQNKVLAGSVDKMSPAKCYTPPALQNLFNGSKLNSINWGEGSDAHCSKSANSLDNRLTRDIGVQFNAVEFKRSTEELKLRASMEERMKKTARKKRKSEGLEASAEQEEEVEMRFRFYESASARKRTVTAEERERAINAAKAFEPPNPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQISNGRQWPVRCLYRGGRAKLSQGWFEFSLENNLGEGDVCVFELLRMKEVVLQVSIFRITEDVGLLSPPPLQQNQKMSSAKLLNTPLQQHLTSTKMIRN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00765 323 Pfam B3 DNA binding domain 192 282 IPR003340 GO:0003677
Phac11g00765 323 Gene3D - 166 286 IPR015300 -
Phac11g00765 323 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 78 286 IPR044837 -
Phac11g00765 323 SMART B3_2 189 284 IPR003340 GO:0003677
Phac11g00765 323 ProSiteProfiles B3 DNA-binding domain profile. 189 284 IPR003340 GO:0003677
Phac11g00765 323 CDD B3_DNA 187 282 IPR003340 GO:0003677
Phac11g00765 323 SUPERFAMILY DNA-binding pseudobarrel domain 182 283 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00765 Phac-Chr11 4917151 4921141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00765 127 287 REM Transcription Factor Family AT1G49480 68.098 4.23e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac11g00765 B3 4e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00765 - - var:108340232 575.474