Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00763 ATGACGCACCCTTCTTTCCACAAGCTTCTTCTCCCCTCCACTCTCCAACCCAACCAACTGAGGCTTCCAGATGATTTTATGAGGAAATATGGGGGGGAACTTTCTCCAATTGTTACCCTCTCTGTTCCTGATGGTAGTGTCTGGCGTGTAGGATTGAAAAAGGCAGACAACAAGTGTTGGTTCCTTGACGGTTGGCAAGAGTTTATTCAGCACTATTCCATTGGGGTTGGATACTTGTTGGTTTTCAGATACGAAGGAAAGTCATCTTTCAATGTTCATGTTTTTAATTTGGCTACTTCTGAGATAAACTATCAATCAGCCATGCGATGTAGTAATGAAGGGCCTCACTTTGCAAATCTTCTTAAATTTTTTGAAGAAATGGATGATGAAGATTCTATTGAAATCTTGGATTCATCACCATCCCATCTTGTTCCCAGTTCATTGCAAAATAAAGTTCTTGCTGGATCAGTAGATAAAATGTCGCCTGCAAAGTGTTATACACCTCCAGCATTGCAGAATCTGTTCAATGGATCTAAACTTAATAGCATAAACTGGGGAGAGGGTAGTGATGCGCATTGTTCGAAAAGTGCCAATTCCCTGGATAATCGATTGACAAGAGACATAGGTGTTCAATTTAATGCAGTTGAGTTTAAAAGATCTACTGAAGAATTGAAATTGCGTGCTTCCATGGAGGAAAGGATGAAAAAAACTGCAAGAAAGAAGCGGAAATCAGAGGGACTGGAAGCCTCTGCTGAACAAGAAGAGGAAGTTGAAATGCGCTTTAGATTTTATGAAAGTGCTTCTGCAAGAAAAAGAACCGTGACAGCAGAAGAAAGAGAGAGGGCCATCAATGCAGCAAAAGCATTTGAACCACCTAATCCTTTCTGTCGGGTTGTCCTAAGGCCCTCCTATCTATACAGAGGATGTATAATGTATCTGCCATCCTGTTTTGCAGAAAAACATTTGAATGGAGTTTCGGGGTTTATTAAACTTCAGATCTCTAATGGGAGACAGTGGCCAGTTCGCTGCCTGTATAGGGGAGGTAGAGCCAAGTTAAGCCAGGGGTGGTTTGAATTTTCATTAGAGAACAATTTAGGAGAAGGTGATGTGTGTGTGTTTGAGCTTCTTAGAATGAAAGAAGTAGTGCTGCAAGTTAGCATCTTTCGCATTACTGAGGATGTGGGATTGTTGAGCCCTCCTCCTTTGCAGCAGAATCAAAAGATGAGCTCAGCTAAACTGCTGAACACTCCCTTGCAGCAACACCTTACTTCAACTAAAATGATTAGAAATTAG 1293 0.4138 MTHPSFHKLLLPSTLQPNQLRLPDDFMRKYGGELSPIVTLSVPDGSVWRVGLKKADNKCWFLDGWQEFIQHYSIGVGYLLVFRYEGKSSFNVHVFNLATSEINYQSAMRCSNEGPHFANLLKFFEEMDDEDSIEILDSSPSHLVPSSLQNKVLAGSVDKMSPAKCYTPPALQNLFNGSKLNSINWGEGSDAHCSKSANSLDNRLTRDIGVQFNAVEFKRSTEELKLRASMEERMKKTARKKRKSEGLEASAEQEEEVEMRFRFYESASARKRTVTAEERERAINAAKAFEPPNPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQISNGRQWPVRCLYRGGRAKLSQGWFEFSLENNLGEGDVCVFELLRMKEVVLQVSIFRITEDVGLLSPPPLQQNQKMSSAKLLNTPLQQHLTSTKMIRN* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00763 430 CDD B3_DNA 4 96 IPR003340 GO:0003677
Phac11g00763 430 ProSiteProfiles B3 DNA-binding domain profile. 296 391 IPR003340 GO:0003677
Phac11g00763 430 SMART B3_2 6 98 IPR003340 GO:0003677
Phac11g00763 430 SMART B3_2 296 391 IPR003340 GO:0003677
Phac11g00763 430 PANTHER B3 DOMAIN-CONTAINING 3 379 - -
Phac11g00763 430 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Phac11g00763 430 SUPERFAMILY DNA-binding pseudobarrel domain 2 96 IPR015300 -
Phac11g00763 430 Pfam B3 DNA binding domain 299 389 IPR003340 GO:0003677
Phac11g00763 430 Pfam B3 DNA binding domain 6 95 IPR003340 GO:0003677
Phac11g00763 430 CDD B3_DNA 294 389 IPR003340 GO:0003677
Phac11g00763 430 Gene3D - 273 393 IPR015300 -
Phac11g00763 430 Gene3D - 1 98 IPR015300 -
Phac11g00763 430 SUPERFAMILY DNA-binding pseudobarrel domain 289 390 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00763 Phac-Chr11 4917151 4921141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00763 1 395 B3 DNA Binding Superfamily AT3G18990 51.250 7.83e-132 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac11g00763 B3 6.6e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00763 - - var:108340232 763.451