Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00761 ATGAGTGGTGCGGAGAAGTACCCAGATTTCTTCAAAGTCTTCCTTCAAGAACAACACTACGAAAGAATGCTTATTCCAAATGCTTTTGTGAAGTTGCATGGGTTACAGGGAAGGATCCCTGAGGATGTTCTCCTCAGGAATCGTAGTGAGAGAGTGTGGCATGTTAAAACACGTTTTTTTGGAGACAGATTATATTTCGATGATGGGTGGAAGATTTTCCATGAAGAAAACTGCTTAGGAAATGCAGATTTTCTAGTATTCAGATATGACGGGGTTAATGAGTTCAGGGTCACAATCCTTGAAATATCAACGCAGTGTGAGAAAACTCTGGTAAAGATTGAGGAGGAGGAGGAGGGGAATGAAGAAGAGAAAGCAGCTGCGCAAGTTGAAGAGACAGTGATAACACAGGAGGAGCAAGCTGAGGACTGTGACATAGAGGACGAGGAAGACAGCCAAGATCAGGACTACGATGACGACAATGACGATAGTGATTTTGAGGATGATGATGATGATGATGAGAACACAGAGATGGAAGAAGAGAGTGAAGAAGAAAACAGTGTTGGCCCTGTTGGATACGCGAGTCAACGTTATCACAAAACTTGCAGAAGGGACACTGCATCAAGTTCCTACCCCCAGACTGAAGAAGACACTTTCAAAGACGATGAATTTGATCCTGAAATGTGCATTCAGCCAGAGAATAATTTTTTTGAAGCAAAACTCTACAGAAGTAGACCCAACGAATTGCATATTCCAGGAATCGCCATTCAAGATTTTTCCCTTAGTTTTCCTGAAAAGATTACCCTTAAATGTTGCCAACACTGCCAGCGTAAGCTCTGTACATTCATTGTCACAACAGGATATTCAAAGAAACCAATTGCAAGACTATCATCTCAACTTGGCACAACAGGCACCCATCAGAAAAAGATATTTAGAAGTGACAGGAAAAGTGTGTAG 954 0.4182 MSGAEKYPDFFKVFLQEQHYERMLIPNAFVKLHGLQGRIPEDVLLRNRSERVWHVKTRFFGDRLYFDDGWKIFHEENCLGNADFLVFRYDGVNEFRVTILEISTQCEKTLVKIEEEEEGNEEEKAAAQVEETVITQEEQAEDCDIEDEEDSQDQDYDDDNDDSDFEDDDDDDENTEMEEESEEENSVGPVGYASQRYHKTCRRDTASSSYPQTEEDTFKDDEFDPEMCIQPENNFFEAKLYRSRPNELHIPGIAIQDFSLSFPEKITLKCCQHCQRKLCTFIVTTGYSKKPIARLSSQLGTTGTHQKKIFRSDRKSV* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00761 317 CDD B3_DNA 8 100 IPR003340 GO:0003677
Phac11g00761 317 Pfam B3 DNA binding domain 10 99 IPR003340 GO:0003677
Phac11g00761 317 SUPERFAMILY DNA-binding pseudobarrel domain 6 102 IPR015300 -
Phac11g00761 317 ProSiteProfiles B3 DNA-binding domain profile. 8 103 IPR003340 GO:0003677
Phac11g00761 317 SMART B3_2 10 103 IPR003340 GO:0003677
Phac11g00761 317 MobiDBLite consensus disorder prediction 137 225 - -
Phac11g00761 317 Coils Coil 110 132 - -
Phac11g00761 317 Gene3D - 2 106 IPR015300 -
Phac11g00761 317 PANTHER B3 DOMAIN-CONTAINING 5 212 - -
Phac11g00761 317 MobiDBLite consensus disorder prediction 137 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00761 Phac-Chr11 4911148 4915796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00761 1 156 REM Transcription Factor Family AT3G06220 27.841 4.71e-14 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac11g00761 B3 2.2e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00761 - - var:108340234 368.237