LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac11g00710	ATGATGGAAAAAAACAAGACAGTTGCCCAGTATGATGACAGAAGTTCTGTTCCCAATAATGAAATACCAAACCTTCCCCAACGCCAAACTCCTTGGTCTACTTCTCAGGCTTCAGCTTTTCATAAATTTAGGTCTACTCCAACTTTCAGATCAACTCCAGCTAGTCCTCACTTTTATTCCTCCTGGTTTGGAAGTCAGATGTGGAATAGGCCAATTCAATATGGTTCTCCATATCAAAATGTGGCGTTCTCCAATTATGCTATGATGGCAGCAAGGGTTGGTCCGAGTTCTCTATTAGCTTCTGCTAATACAATACAAAGGACTCCTGCTAATACAATACAAAGGACTCCTGCTGAAAACTACATGCTTTTAAATAACCATTCTTACAAGAGCTCACAACCTACAAGTAACGTAACTCCCAAAGCCAGAGAAAATGAAAGAAGGTATTCAATCCAAGGAATCAACTTGAAAGGATCAATAAGGAGTGTGACTAGTGAAAGCAAGGAAACAACTGTTGTAGTCAATGATAATAAGAATGATGGTGGATCAACAAAGGTGCATATACATCTTGGCAATGAAAGTAACTATACAAAAGAACTAAGAAAAAGAAAGGCAGAGCAGACATCATCCAAGATCTCAAGCATGAAAAGCATTAAGCTGCAGGATATTCCTTCAAGGCAACAGCAATCCAGGATGATGCCTGGAACTGGTAAGTTTGAAGCAAATCCAACCGATCTGAATCAGAATTTGCATATAGACCCCAATGCATCTGCCGCTAATCCTCTACTTGAAAAAGAGGAAAGTGATGAAACAAAAGAACAAAGAAAAAGGAAGGAGATGAATAAATCATCTAAGAGACCAAAGGTGAAGATCATAAAGCTGAAGGATATCTCTTCAATTAAGCAAACACAATCCAGTATGACAGCCGGAAATGGGGGAGGTGCAAACAATGTGACTAGAATTGAAAATTGTAATTCTATTCAAGACAAAACAAATATTGCGTCGGATCATTTTGAAGCAAATCCAACTGAGGGGAACCGGATATTGAGTACAAAACTATCTGCCACTAATCCTCAACTTGCAAAGGAGGAAAGTGATGAGGCGAAAGAACAAAGAAGAAGGCAATCAAAGAAGAAATCAGCTAAGAGATCAAGGTTGAAGATGAAGGTGGAACGTGAAAGGCTCAATGCTTCCATTAGAAATCTAGATGTCGAAAATGCTGGGCTCAGAAAAGAGCTTCATGACCTTATTGATGAGTATAACAAGCTCACAGAAAATAACGATTCCTTAATGGATGAACTCAATGAGATGTTCGGTCAAGAAACAGTAATGGATGTTTTCAATATGCAGTCTGCTGACTCAGATGCTGATGATGATCAGAACTCAAATGACACTTGA	1398	0.3891	MMEKNKTVAQYDDRSSVPNNEIPNLPQRQTPWSTSQASAFHKFRSTPTFRSTPASPHFYSSWFGSQMWNRPIQYGSPYQNVAFSNYAMMAARVGPSSLLASANTIQRTPANTIQRTPAENYMLLNNHSYKSSQPTSNVTPKARENERRYSIQGINLKGSIRSVTSESKETTVVVNDNKNDGGSTKVHIHLGNESNYTKELRKRKAEQTSSKISSMKSIKLQDIPSRQQQSRMMPGTGKFEANPTDLNQNLHIDPNASAANPLLEKEESDETKEQRKRKEMNKSSKRPKVKIIKLKDISSIKQTQSSMTAGNGGGANNVTRIENCNSIQDKTNIASDHFEANPTEGNRILSTKLSATNPQLAKEESDEAKEQRRRQSKKKSAKRSRLKMKVERERLNASIRNLDVENAGLRKELHDLIDEYNKLTENNDSLMDELNEMFGQETVMDVFNMQSADSDADDDQNSNDT*	466

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac11g00710	465	Coils	Coil	392	440	-	-
	Phac11g00710	465	Pfam	bZIP transcription factor	367	427	IPR004827	GO:0003700\|GO:0006355
	Phac11g00710	465	SMART	brlzneu	365	429	IPR004827	GO:0003700\|GO:0006355
	Phac11g00710	465	MobiDBLite	consensus disorder prediction	1	33	-	-
	Phac11g00710	465	MobiDBLite	consensus disorder prediction	263	280	-	-
	Phac11g00710	465	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	367	430	IPR004827	GO:0003700\|GO:0006355
	Phac11g00710	465	MobiDBLite	consensus disorder prediction	205	297	-	-
	Phac11g00710	465	PANTHER	G-BOX-BINDING FACTOR 3-RELATED	264	445	IPR044827	GO:0003700\|GO:0006355\|GO:0043565
	Phac11g00710	465	MobiDBLite	consensus disorder prediction	210	255	-	-
	Phac11g00710	465	MobiDBLite	consensus disorder prediction	352	387	-	-
	Phac11g00710	465	MobiDBLite	consensus disorder prediction	11	33	-	-
	Phac11g00710	465	CDD	bZIP_plant_GBF1	371	421	IPR045314	GO:0003700\|GO:0006355

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac11g00710	367	446	bZIP Transcription Factor Family	AT4G36730	42.500	1.72e-12	66.2

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Phac11g00710		bZIP_1	3.8e-07	CL0018

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac11g00710	-		K09060	var:108339461	547.74