Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00670 ATGTTTATTTCCTCTGTTCCACTGCACAAACCAATAACAACATGCACCATTTTCAATTGCCAAAACCCAAACCAGCATCACTCCATTCTCCGCAAGCACAATTCCAAATCCACCGCGTATCTCCTTCAGCATCTCGCCCTCAAGGATGGAGTACCCATTCCCACTTCCATTCCCAAACCCAGCGAGCTTTTAGACCCAATGCCCCACGATGAGAAAGTGAAGGTTTTGGAGCTTTCCCTCGTCAGGAAAAGGACCCCTCAGTTTCCTGGTTCCATCTACGCTCAGTCTCCCAGCGACTCCGATGTGGGTTCTTCTCTGCCCCCTATCCGTACTCTCTTTCAATCAGGTGCTAACCCTGATGAGAAGGAAGAGGAGGAGAAGGAGATGATAATGCGCGCTCTCGAGATTCGCAGAAAGGTCACTGAAGAGGTTTTCAAAGAAGCCATGCGAAAGGGAAAGTTTGGAATTACCTACTCTACCAATTTGATTGGCAGGTTATCCGGCTTTCTGGATCACATCATGATTGAAGCTGCTAACTTGAAAAGATTGCCCGGATTTTCAAACTCCACCTTCAATTTACGCGCCAAAACTGTCATTGATGACTCTAAAGTTGTGCCACTTATTAGATGGTTGAAGCATAATGCACTGTCGTATCCTCGGATAGCGAAGATCATTTTGATGTCAAGAGGAAAACCCGAGGCCATAAGAAGTTTTGTCATGTGGTTGAAATCGGTACGTGTGAAAGGTGAGTTTCTCGGTGTTGTAATGTTGAAGGCCGGAGAGAATATTTTGCAGCGCAGACATGAGGAGCTGGATGAGATTGTTCAGTATTTGGAGTCCAATGGAGTAAGGAGGGATTGGATGGGTTATGTCATTAGTCGTTGTCCTCAGTTATTGTCTTACAGCTTAGAAGAAGTGAAGACTCGTGCACATTTCTTCATAGATATGGGTTTAAATGAGAAAGATTTTGGTACAATGGTTTTCGATTTTCCTAGAGTTCTTGGTTACTATTCTCTGGAAGAAATGAATGAAAAGGTTAATTACTTAAAAGAATTTGGGCTTCAAACTGAGGATGTTGGCAAATTGCTTGCATTTAGGCCACAATTGATGGCGTGCAGCATTGAGGAACACTGGAAGCCTCTTGTTAAGTATCTGTATTATTATGGGATCACTCGAAATGGGATGAAGAGAATGCTTGTCATTAAACCAATGGTCTTTTGTGCTGACTTGGAGAAGACTATTGTGCCAAAGGTACAATTTTTTGAAGATATAGGGGTTCGCAAGGATGGGATTGGCAGCATGCTTGTGAAGTTTCCACCTCTACTCACTTACAGCCTGGAGAAGAAAATTAAACCAGTGGTCATATTCTTGATGACCAAAGCTGGAGTCAGTGAAAAAGATATTGGCAAGGTTGTGGCTCTTGGACCTGAGCTCTTGGGATGCAATATAGTGCATAAGCTTTATGTAAATATACAATCCAGATGTCCTTCGTCCCAAGTATATTTATTTGCGAAAGTCCATGGTCCGGCCTTTGAAAGATGTCATTGA 1548 0.4315 MFISSVPLHKPITTCTIFNCQNPNQHHSILRKHNSKSTAYLLQHLALKDGVPIPTSIPKPSELLDPMPHDEKVKVLELSLVRKRTPQFPGSIYAQSPSDSDVGSSLPPIRTLFQSGANPDEKEEEEKEMIMRALEIRRKVTEEVFKEAMRKGKFGITYSTNLIGRLSGFLDHIMIEAANLKRLPGFSNSTFNLRAKTVIDDSKVVPLIRWLKHNALSYPRIAKIILMSRGKPEAIRSFVMWLKSVRVKGEFLGVVMLKAGENILQRRHEELDEIVQYLESNGVRRDWMGYVISRCPQLLSYSLEEVKTRAHFFIDMGLNEKDFGTMVFDFPRVLGYYSLEEMNEKVNYLKEFGLQTEDVGKLLAFRPQLMACSIEEHWKPLVKYLYYYGITRNGMKRMLVIKPMVFCADLEKTIVPKVQFFEDIGVRKDGIGSMLVKFPPLLTYSLEKKIKPVVIFLMTKAGVSEKDIGKVVALGPELLGCNIVHKLYVNIQSRCPSSQVYLFAKVHGPAFERCH* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00670 515 Gene3D Transcription termination factor 3, mitochondrial 207 376 IPR038538 -
Phac11g00670 515 PANTHER CGI-12 PROTEIN-RELATED 358 480 IPR003690 GO:0003690|GO:0006355
Phac11g00670 515 SMART mt_12 324 355 IPR003690 GO:0003690|GO:0006355
Phac11g00670 515 SMART mt_12 289 319 IPR003690 GO:0003690|GO:0006355
Phac11g00670 515 SMART mt_12 360 391 IPR003690 GO:0003690|GO:0006355
Phac11g00670 515 SMART mt_12 396 427 IPR003690 GO:0003690|GO:0006355
Phac11g00670 515 SMART mt_12 432 464 IPR003690 GO:0003690|GO:0006355
Phac11g00670 515 Pfam mTERF 355 486 IPR003690 GO:0003690|GO:0006355
Phac11g00670 515 Pfam mTERF 220 350 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00670 Phac-Chr11 4431631 4435344 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac11g00670 mTERF 1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00670 K15032 - gmx:100813633 765.377