Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00669 ATGTTTATTTCCTCTGTTCCACTGCACAAACCAATAACAACATGCACCATTTTCAATTGCCAAAACCCAAACCAGCATCACTCCATTCTCCGCAAGCACAATTCCAAATCCACCGCGTATCTCCTTCAGCATCTCGCCCTCAAGGATGGAGTACCCATTCCCACTTCCATTCCCAAACCCAGCGAGCTTTTAGACCCAATGCCCCACGATGAGAAAGTGAAGGTTTTGGAGCTTTCCCTCGTCAGGAAAAGGACCCCTCAGTTTCCTGGTTCCATCTACGCTCAGTCTCCCAGCGACTCCGATGTGGGTTCTTCTCTGCCCCCTATCCGTACTCTCTTTCAATCAGGTGCTAACCCTGATGAGAAGGAAGAGGAGGAGAAGGAGATGATAATGCGCGCTCTCGAGATTCGCAGAAAGGTCACTGAAGAGGTTTTCAAAGAAGCCATGCGAAAGGGAAAGTTTGGAATTACCTACTCTACCAATTTGATTGGCAGGTTATCCGGCTTTCTGGATCACATCATGATTGAAGCTGCTAACTTGAAAAGATTGCCCGGATTTTCAAACTCCACCTTCAATTTACGCGCCAAAACTGTCATTGATGACTCTAAAGTTGTGCCACTTATTAGATGGTTGAAGCATAATGCACTGTCGTATCCTCGGATAGCGAAGATCATTTTGATGTCAAGAGGAAAACCCGAGGCCATAAGAAGTTTTGTCATGTGGTTGAAATCGGTACGTGTGAAAGGTGAGTTTCTCGGTGTTGTAATGTTGAAGGCCGGAGAGAATATTTTGCAGCGCAGACATGAGGAGCTGGATGAGATTGTTCAGTATTTGGAGTCCAATGGAGTAAGGAGGGATTGGATGGGTTATGTCATTAGTCGTTGTCCTCAGTTATTGTCTTACAGCTTAGAAGAAGTGAAGACTCGTGCACATTTCTTCATAGATATGGGTTTAAATGAGAAAGATTTTGGTACAATGGTTTTCGATTTTCCTAGAGTTCTTGGTTACTATTCTCTGGAAGAAATGAATGAAAAGGTTAATTACTTAAAAGAATTTGGGCTTCAAACTGAGGATGTTGGCAAATTGCTTGCATTTAGGCCACAATTGATGGCGTGCAGCATTGAGGAACACTGGAAGCCTCTTGTTAAGTATCTGTATTATTATGGGATCACTCGAAATGGGATGAAGAGAATGCTTGTCATTAAACCAATGGTCTTTTGTGCTGACTTGGAGAAGACTATTGTGCCAAAGGTACAATTTTTTGAAGATATAGGGGTTCGCAAGGATGGGATTGGCAGCATGCTTGTGAAGTTTCCACCTCTACTCACTTACAGCCTGGAGAAGAAAATTAAACCAGTGGTCATATTCTTGATGACCAAAGCTGGAGTCAGTGAAAAAGATATTGGCAAGATACAATCCAGATGTCCTTCGTCCCAAGTATATTTATTTGCGAAAGTCCATGGTCCGGCCTTTGAAAGATGTCATTGA 1488 0.4321 MFISSVPLHKPITTCTIFNCQNPNQHHSILRKHNSKSTAYLLQHLALKDGVPIPTSIPKPSELLDPMPHDEKVKVLELSLVRKRTPQFPGSIYAQSPSDSDVGSSLPPIRTLFQSGANPDEKEEEEKEMIMRALEIRRKVTEEVFKEAMRKGKFGITYSTNLIGRLSGFLDHIMIEAANLKRLPGFSNSTFNLRAKTVIDDSKVVPLIRWLKHNALSYPRIAKIILMSRGKPEAIRSFVMWLKSVRVKGEFLGVVMLKAGENILQRRHEELDEIVQYLESNGVRRDWMGYVISRCPQLLSYSLEEVKTRAHFFIDMGLNEKDFGTMVFDFPRVLGYYSLEEMNEKVNYLKEFGLQTEDVGKLLAFRPQLMACSIEEHWKPLVKYLYYYGITRNGMKRMLVIKPMVFCADLEKTIVPKVQFFEDIGVRKDGIGSMLVKFPPLLTYSLEKKIKPVVIFLMTKAGVSEKDIGKIQSRCPSSQVYLFAKVHGPAFERCH* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00669 495 PANTHER CGI-12 PROTEIN-RELATED 347 476 IPR003690 GO:0003690|GO:0006355
Phac11g00669 495 Gene3D Transcription termination factor 3, mitochondrial 226 376 IPR038538 -
Phac11g00669 495 SMART mt_12 324 355 IPR003690 GO:0003690|GO:0006355
Phac11g00669 495 SMART mt_12 289 319 IPR003690 GO:0003690|GO:0006355
Phac11g00669 495 SMART mt_12 360 391 IPR003690 GO:0003690|GO:0006355
Phac11g00669 495 SMART mt_12 396 427 IPR003690 GO:0003690|GO:0006355
Phac11g00669 495 SMART mt_12 432 464 IPR003690 GO:0003690|GO:0006355
Phac11g00669 495 Pfam mTERF 220 349 IPR003690 GO:0003690|GO:0006355
Phac11g00669 495 Pfam mTERF 341 477 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00669 Phac-Chr11 4431631 4435344 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac11g00669 mTERF 2.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00669 K15032 - gmx:100813633 765.377