Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00667 ATGGCTGCAGCTGATGTTGAGTTTCGGTGCTTCGTCGGTGGGCTCGCATGGGCCACCGACGGCGAAGCTCTGGAGAAGGCTTTCTCTAAATACGGGCCAGTCCTTGAATCCAAGATTATCAATGATCGTGAGACCGGAAGATCCAGGGGCTTCGGATTCGTGACCTTTTCCTCAGAGCAGGCCATGAGAGAAGCAATCGAAGGAATGAACGGTCAGAACCTTGACGGTCGTAACATCACTGTGAACGAAGCTCAGTCTCGCGGTGGAGGCGGAGGCGGCGGCGGCCGTGGAGGAGGCGGTTATGGAGGTGGTGGTGGATACAGCCGTGGCGGCGGCGGCGGTGGTGGATACGGTGGTGGTGGCGGATACGGTGGTCGTCGTGAAGGAGGAGGAGGAGGGTATAACCGCAGTGGTGGTTATGGTGGTGGTGGTGGTTATGGTGGAGGTAGAGACCGTGGTTACGGTGATGGTGGGTCCCGCCACTCTCGTGGAGGTGATGGAGGAGATGGTAGCTGGAACTAG 522 0.5862 MAAADVEFRCFVGGLAWATDGEALEKAFSKYGPVLESKIINDRETGRSRGFGFVTFSSEQAMREAIEGMNGQNLDGRNITVNEAQSRGGGGGGGGRGGGGYGGGGGYSRGGGGGGGYGGGGGYGGRREGGGGGYNRSGGYGGGGGYGGGRDRGYGDGGSRHSRGGDGGDGSWN* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00667 173 Gene3D - 2 108 IPR012677 -
Phac11g00667 173 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 5 159 - -
Phac11g00667 173 FunFam Glycine-rich RNA-binding protein GRP1A 2 110 - -
Phac11g00667 173 SUPERFAMILY RNA-binding domain, RBD 8 127 IPR035979 GO:0003676
Phac11g00667 173 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Phac11g00667 173 SMART rrm1_1 9 82 IPR000504 GO:0003723
Phac11g00667 173 CDD RRM2_NsCP33_like 9 84 - -
Phac11g00667 173 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Phac11g00667 173 MobiDBLite consensus disorder prediction 71 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00667 Phac-Chr11 4426217 4427651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00667 2 88 Eukaryotic Initiation Factors Gene Family AT2G23350 31.818 1.72e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00667 - K13195 ccaj:109800369 161.384
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00667 11 4426217 4427651 Phac11g00667 11 4426217 4427651 ECH