Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac11g00664 | ATGTTGCATTGTCTGAACGGTTCGGGGAATCTAGGAGCCAGTTGTTCGGACATGACAGTTTTGGAAAGACAAAGGGAAGCAACCATGAAGTGGCAACACCACCATCACGACAATCACCACCCTTACTTTTCCGCAACGGAGTTTCACGTTAACCTCGTTTTCTCTTCTTCTTCCAACAATCTTCCTCAGAGTCAGGGCTTGGTCATGGCGCGTGATGATTCCGCGCTTGCTAATGTCTTGGCTCATTCTCTCAAACCCGACCCGGGTCTCTGCCCCGAACTCGACACTGGATTCGGATCTTCTTCCGTTATTTTACCCAAGGAAAGCAATAAGAAGAGGAAGCCGCAGAACTTCAAGGTTGCTGCGGAGAGTGATAACAAGGACAAGAGAGTGAAAGTGAGTGGCGAGGAAGGAGAATCCAGAGTGACGCACCAAAGCAGCAACAAAAATGGCAAATCCAACGCAGTTAAGAACAACAGAGAAACCTCTGCGGATTCTTCCAAGGATGATTCGAAAGCGTCCGAGGTTCAGAACCAGAAGCGTGAGTACATTCATGTCCGAGCGCGTCGTGGTCAAGCCACTGATAGTCATAGCTTAGCTGAAAGAGTTAGAAGGGAGAAAATCAGTGAGAGAATGAAGTATTTGCAAGATTTGGTTCCGGGTTGCAACAAAATTGCCGGCAAAGCTGGAATGCTTGATGAAATCATTAACTATGTTCAGTCTCTTCAACGACAAGTTGAGTTCTTGTCAATGAAATTAGCGGCTGTAAATCCAAGCATTGACGAACTATTTGCCAGAGAGGTGTTTCCTTCTTTGTCTCAAGGTTTACCCAACATTGGGATGCCATCAGATATGAGAATGTGTAACAACCCTTCGTATCTTCAGTTGAATCCAACACAACCACATGTATCATGTTGTGGTGGATTAATAAATAACGTGGGGATAAGCCCTCCCAATATGGGACTTCGAAGGAACATTAGTACTACACATGTACCTTTGTCCGAAGCGTTTCTTGACTCCTCCTGTTTCACTCAAATTCTACCCTCTTCAAATTGGGAAGGTGATTTTCAAAGCCTTTACAATGTTGCTTTTGATCAAGGGCGAGCAACATCCTTTCCTTCTCAACCATTTACAGGTGCAGTTGAAAGTAGCAATCCGAAGATGGAGATGTAA | 1173 | 0.4501 | MLHCLNGSGNLGASCSDMTVLERQREATMKWQHHHHDNHHPYFSATEFHVNLVFSSSSNNLPQSQGLVMARDDSALANVLAHSLKPDPGLCPELDTGFGSSSVILPKESNKKRKPQNFKVAAESDNKDKRVKVSGEEGESRVTHQSSNKNGKSNAVKNNRETSADSSKDDSKASEVQNQKREYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPSIDELFAREVFPSLSQGLPNIGMPSDMRMCNNPSYLQLNPTQPHVSCCGGLINNVGISPPNMGLRRNISTTHVPLSEAFLDSSCFTQILPSSNWEGDFQSLYNVAFDQGRATSFPSQPFTGAVESSNPKMEM* | 391 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac11g00664 | 390 | Gene3D | - | 189 | 263 | IPR036638 | GO:0046983 | |
Phac11g00664 | 390 | SMART | finulus | 198 | 248 | IPR011598 | GO:0046983 | |
Phac11g00664 | 390 | FunFam | Basic helix-loop-helix transcription factor | 189 | 261 | - | - | |
Phac11g00664 | 390 | MobiDBLite | consensus disorder prediction | 107 | 143 | - | - | |
Phac11g00664 | 390 | CDD | bHLH_AtBPE_like | 182 | 261 | - | - | |
Phac11g00664 | 390 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 192 | 242 | IPR011598 | GO:0046983 | |
Phac11g00664 | 390 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 190 | 262 | IPR036638 | GO:0046983 | |
Phac11g00664 | 390 | MobiDBLite | consensus disorder prediction | 144 | 161 | - | - | |
Phac11g00664 | 390 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 110 | 287 | IPR024097 | GO:0006355 | |
Phac11g00664 | 390 | MobiDBLite | consensus disorder prediction | 162 | 201 | - | - | |
Phac11g00664 | 390 | Pfam | Helix-loop-helix DNA-binding domain | 196 | 243 | IPR011598 | GO:0046983 | |
Phac11g00664 | 390 | MobiDBLite | consensus disorder prediction | 102 | 201 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac11g00664 | Phac-Chr11 | 4407165 | 4410067 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac11g00664 | 5 | 360 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT4G34530 | 38.442 | 5.50e-58 | 190 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Phac11g00664 | HLH | 3.5e-06 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac11g00664 | - | - | vun:114168601 | 645.195 |