Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00648 ATGGCTCCAAAGAAGGATAAGGCTCCTCCACCTTCCTCCAAGCCCGCCAAATCTGGCGGTGGAAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAATAACATGGTGCTGTTTGACCAGGGCACATATGACAAACTCCTCTCTGAAGCACCCAAATACAAGCTCATCACTCCTTCCATTCTCTCTGATCGTTTGAGGGTTAATGGATCACTTGCAAGGAAGGCTATTAGAGAACTGATGGCTAGAGGTTCAATCAGGATGGTGTCTGCCCATGCAAGTCAGCAAATTTACACCAGGGCAACAAACACCTAA 327 0.474 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRLRVNGSLARKAIRELMARGSIRMVSAHASQQIYTRATNT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00648 108 PANTHER 40S RIBOSOMAL PROTEIN S25 1 108 IPR004977 -
Phac11g00648 108 Gene3D - 21 108 - -
Phac11g00648 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Phac11g00648 108 MobiDBLite consensus disorder prediction 1 36 - -
Phac11g00648 108 FunFam 40S ribosomal protein S25 21 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00648 Phac-Chr11 4331055 4332959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00648 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 91.589 1.98e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00648 K02975 - gmx:100789867 161.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00648 11 4331055 4332959 Phac11g00648 11 4331055 4332959 ECH