Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00624 ATGGTTCAAAGAATTGTTGTAGGAAAGCTTGGTATCCAAGCTGATAATGTCAAATATGACAAGTGCTTTGCAAAGTCGAAGCCATCTTCCTCTCAGCACCAAGATGGCCAAACTAGAAAAACTGATAAGATGAAGAAAATGATGAAGTCAAGGTCCTTTCAGCTTTCTGATTTTGACCCTTCTCATTCATCATCTTCAGAAAGGAGCTTATCCCAACCAAGAAAGTCACCAACTATTGCAGCATCCCCTCAACAGCAAAAGGCTTTGGTCAGAAGGTCACCCAACTACATGAAGCCTACCAGCAGTTCAAAAGCAAAAAAAGAGCTTTTGTCGGTTAGTCATCCTCATACTCAATCTAGTTCAGATGGTAAGAGTCTAAAACAAAAGTGTATGAGAAATTCAAAAACTAGTTTTGTTTCTTGCAAAGAACCTGCAAAAACTTTGTCTGGATCGTGTAGTTTGAATTCAGTGAGGACATTAACCAAGAGTCCTGGTTTTAAGCCTTGTAATGCTTGTTCAAAAAAATTCACATCAGCAGTTCTGTTCGAAGATGTGAATGCACCAGAGAGGGCTACCTGCTCTTCAACTTTGAAAGACTATAACTTTCCCGAGTACCTCGCGCTTCACCCCGGGGGAACTGAGTCTGAGGGAGTTTCAGTCATGAAGGTTTGCCCATATGCATGCTGTTCTCTTAATGGCCATGATCATGCTCCTTTGCCTCCATTGAAGAACTTCATGTCAGCAAGGAGGCATCTTTTGGAGACCCAGAAGAAGAATATGAAGCTGGAAATTGTGGTCCCTCAAAGTTGGAATGTGCCCCGCTGTGATACAAAACAAGACTCTGATATTGAGCAGATCGTGTTTCATGAAAAACCTGCATGTGATGAAGCTGCTACTGGTAATCCAGCAATCTCTCCCTTGGCACAAGAAATTGGTATGGATTTCTTTTTAGAAATGTATGCTAATGAAAGGGAAGGAGCTGACGAAGTGAGAAAATTCAACCCCGTCAAAGACCTTGAAAAACAAGAAGATATCAATTTTGCAAAGGATGAGAATGGCATTGCAGCAGAAGAGGATGGTGTCAAGCAAGTTACTCCAGGTGTGACTCATGATCCCCCAAAGCCTCAGATCAATTTTGAAGAGGATTTCAAAAACTACTTCACTGCTGATGCAACTGAAGTAGATAACAAAGGGAGCTTTCATCTTGGAGAAGATGTTCAAGATGCAGAGGAAAACCAACCAACTAGCTGGTTTCATGAAGAAACCTGTACAGGAAGCTACTGCAATGAGGCTAGATATGACGGGGAACACATGGAGGATATTGAATTGGATGAGTCCTATTCCACAAGCTGGGAGGAGAAACATTTCGGTGAATTCAGCTATGAAGACAATACTGATTCTTCCATCTGCTCAGGGGAGGAGATCAACTCAAAACTCAAGTCGCTATCAGAGAGTTCGCATGATATATCTGAAATGTGGTTAGATGACATCTTTAACAGCCATTATGCAGACATTATGGTTGAAGAGGTCAGACTCCAAGAAGCCAAAGAAGAGAGGACAAACTGTTTTGAAGCACAGCCTCATTACACTAATGTTGTTCTGGAAGACACAAGTGAAAACATCGAGTTTGTGGTTCAAGAAACATACTATCCATCCAAAGCTATAAATTCTGAGTATGACGAATCTACTTTGACCGAGGAAGTATTTCAGCATCTAACAATTGGAAAAGATAGCAACAGAGAAAATGAGAAACATTTGGATTATGAGGTTGGTTGTGTCTCAATGTTACAGGAGGAACAGATAGTTAAAAATAGTGAAGGCCACTACAATAGTGAAAGTTGCAAGATTGATGAGAGCTGTGAAGACAAAGAAGCAAGCCTAGAGAACGACGATGATGAATTTAACCAGGAGCACCGAATTCACATGCCTAAACACCAAATGATAGAGGAAAGAAAAAATGCAGAGGAATGGATGCTTGATTTCGCACTCAGAAAAGCTGTCACGCAACTTGCTCCGGCAGGGAAAAGGAAGGTGTCATTGCTAGTTGAAGCTTTTGAAGCAGTAATGTCCATGCCCAAATGCGATTCTCATACAAGAAATGATTCACCCTTTGCTCGTGCAAAACCTATTAAAGCGTGTAGCTGA 2145 0.4126 MVQRIVVGKLGIQADNVKYDKCFAKSKPSSSQHQDGQTRKTDKMKKMMKSRSFQLSDFDPSHSSSSERSLSQPRKSPTIAASPQQQKALVRRSPNYMKPTSSSKAKKELLSVSHPHTQSSSDGKSLKQKCMRNSKTSFVSCKEPAKTLSGSCSLNSVRTLTKSPGFKPCNACSKKFTSAVLFEDVNAPERATCSSTLKDYNFPEYLALHPGGTESEGVSVMKVCPYACCSLNGHDHAPLPPLKNFMSARRHLLETQKKNMKLEIVVPQSWNVPRCDTKQDSDIEQIVFHEKPACDEAATGNPAISPLAQEIGMDFFLEMYANEREGADEVRKFNPVKDLEKQEDINFAKDENGIAAEEDGVKQVTPGVTHDPPKPQINFEEDFKNYFTADATEVDNKGSFHLGEDVQDAEENQPTSWFHEETCTGSYCNEARYDGEHMEDIELDESYSTSWEEKHFGEFSYEDNTDSSICSGEEINSKLKSLSESSHDISEMWLDDIFNSHYADIMVEEVRLQEAKEERTNCFEAQPHYTNVVLEDTSENIEFVVQETYYPSKAINSEYDESTLTEEVFQHLTIGKDSNRENEKHLDYEVGCVSMLQEEQIVKNSEGHYNSESCKIDESCEDKEASLENDDDEFNQEHRIHMPKHQMIEERKNAEEWMLDFALRKAVTQLAPAGKRKVSLLVEAFEAVMSMPKCDSHTRNDSPFARAKPIKACS* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00624 714 SMART CaM_binding_2 593 690 IPR012417 GO:0005516
Phac11g00624 714 Pfam Plant calmodulin-binding domain 608 690 IPR012417 GO:0005516
Phac11g00624 714 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 205 212 IPR018506 GO:0020037
Phac11g00624 714 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 644 690 IPR044681 GO:0005516
Phac11g00624 714 MobiDBLite consensus disorder prediction 23 128 - -
Phac11g00624 714 MobiDBLite consensus disorder prediction 54 128 - -
Phac11g00624 714 MobiDBLite consensus disorder prediction 36 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00624 Phac-Chr11 4173542 4175929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00624 644 688 Calmodulin-binding Proteins AT2G38800 68.889 7.43e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00624 - - pvu:PHAVU_011G0417000 1220.3