Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00622 ATGGGTGAGGTAGCGCGTAGTGGATGTTGTCCTCCGATGGATCTGTTCCGTTCGGAGCCGATGCAACTGGTTCAGCTCATCATCCCAATCGAATCTGCTCACCGCACTGTCTCCTACCTCGGCGACCTTGGCCTTCTTCAGTTCAAAGATCTCAATGCAGATAAGAGTCCTTTTCAGCGGACCTATGCAAATCAGATAAAAAGATGTGGAGAGATGGCTCGGAGACTGCGTTATTTCAAGGAGCAAATGTTGAAGGCAGGTGTTTCACCAAAATATTCCACAACACCAGTTGATGTGAACATTGATGACCTTGAGGTAAAACTTACAGAAATTGAGTCAGAGTTAACTGAGATGAATGCAAATGGTGAGAAGTTGCAACGATCGTATAATGAGCTTGTGGAGTATAAGCTTGTTTTACATAAGGCTGGTGAGTTTTTCCGCTCAGCTCAAAGCCGCGCCATAGAGCAGCAGAGAGAATATGAATCCCGTCATCTGGGGGGTGAATCTATGGAAACACCTTTATTACAGGACCAAGAATTGTTAGGTGATTCATCAAAGCAAATTAAGTTGGGGTTTTTAGCAGGTCTTGTTCCCAGGGAAAAGTCTATGGTATTTGAGAGAATTTTATTTCGTGCTACTAGAGGAAATGTATTTTTAAGGCAGGCTACTGTTGAGGACCCTGTCACAGACCCTGTTTCTGGAGAAAAGACTGAGAAAAATGTTTTTGTGATCTTCTATGCTGGTGAAAAAGCAAAAGCCAAGATTCTTAAAATATGTGAAGCTTTTGGTGCTAATCGTTACCCTTTTGCTGAGGAACTTGGAAAGCAAGCTCAAATGATCACAGAGGTTTCTGGAAGACTTGTAGAATTGAAGACCACTATAGATGCTGGACTACTTCACCGGAATAACTTGCTAAATACTATTGGGGCTCAATTTGAGCAATGGGATGTTCTGGTGAGGAAGGAGAAATCTATTCATCATATCCTGAACATGCTGAGCCTTGATGTGACGAAAAAATGTCTTGTGGCTGAGGGATGGAGTCCTATCTTTGCAAATAAGCAGATCCAGGATGCATTACAGCGGGCAGCATTGGACTCTAATTCCCAAGTCAATGCCATTTTCCAAGTTCTGCATACCAGGGAGTTGCCGCCTACCTATTTCCGCACAAATAAATTTACTTCTTCTTTTCAAGGAATTATTGATTCATATGGGGTTGCTAAGTATCAGGAGGCAAATCCAACTGTGTATACTGTAGTTACCTTTCCATTTCTTTTTGCTGTTATGTTTGGCGATTGGGGGCATGGAATATGTTTACTACTGGCAGCTCTATATTTCATAATCAGGGAGAAGAAACTTTCTAGTCAGAAGCTTGATGACATCACGGAGATGACTTTTGGAGGTCGTTATGTTATTTTGTTGATGGCGCTGTTCTCAATCTACACTGGTTTTATCTATAATGAGTTCTTTTCTGTTCCATTTCCGCTCTTTGCCCCCTCTGCATATGATTGCCGTGACCTTTCTTGCAGGGATTCTACAACAGTTGGCTTGATAAAAGTGCGTGACACTTACCCTTTTGGAGTGGATCCTGTATGGCATGGTACACGAAGTGAACTACCATTTCTGAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGAGTTGCTCAAATGAACCTTGGAATTGTGATGAGCTATTGCAATGCCATATTCTTTAGAAACAGAGTGAATGTGTGGTTCCAGTTCATTCCCCAGATGATATTTCTCAACAGTCTATTTGGCTACCTAGCCCTTCTTATTATTGTCAAGTGGTCTACTGGTTCTCAAGCTGATTTGTACCATATTTTGATATACATGTTCCTGAGCCCGACTGATGATTTGGGTGAGAACCAACTATTTGTTGGTCAGAGAAATTTGCAGCTTGTGCTTTTGCTTCTGGCTGTTGTCTCTGTCCCCTGGATGCTGGTTCCAAAACCTTTTATTTTAAAGAAGCAACATGAAGCTAGGCACGGGGTTGAATCCTATACACCGCTTGAAAGCACAGATGAGAGCCTACAAGTGGAGTCAAACCACGATTCCCATGGTCATGAGGAATTTGAGTTCAGTGAAGTCTTTGTACATCAACTTATACATACCATAGAATTTGTACTTGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTCAGCCTTGCTCATTCAGAGTTATCAAGTGTATTCTACGAGAAGGTTCTGCTGATGGCATGGGGGTACAATAATGTGATTATCCTGATAGTGGGTCTCATTGTTTTCATCTTCGCCACCGTCGGAGTGTTACTTGTCATGGAAACTCTGAGCGCGTTCTTGCATGCGTTACGACTTCACTGGGTGGAGTTTCAGAACAAGTTTTACGAGGGCGATGGTTACAAATTCCACCCTTTCTCGTTCTCCTTACTGGATGATGAAGAATGA 2457 0.4237 MGEVARSGCCPPMDLFRSEPMQLVQLIIPIESAHRTVSYLGDLGLLQFKDLNADKSPFQRTYANQIKRCGEMARRLRYFKEQMLKAGVSPKYSTTPVDVNIDDLEVKLTEIESELTEMNANGEKLQRSYNELVEYKLVLHKAGEFFRSAQSRAIEQQREYESRHLGGESMETPLLQDQELLGDSSKQIKLGFLAGLVPREKSMVFERILFRATRGNVFLRQATVEDPVTDPVSGEKTEKNVFVIFYAGEKAKAKILKICEAFGANRYPFAEELGKQAQMITEVSGRLVELKTTIDAGLLHRNNLLNTIGAQFEQWDVLVRKEKSIHHILNMLSLDVTKKCLVAEGWSPIFANKQIQDALQRAALDSNSQVNAIFQVLHTRELPPTYFRTNKFTSSFQGIIDSYGVAKYQEANPTVYTVVTFPFLFAVMFGDWGHGICLLLAALYFIIREKKLSSQKLDDITEMTFGGRYVILLMALFSIYTGFIYNEFFSVPFPLFAPSAYDCRDLSCRDSTTVGLIKVRDTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIVMSYCNAIFFRNRVNVWFQFIPQMIFLNSLFGYLALLIIVKWSTGSQADLYHILIYMFLSPTDDLGENQLFVGQRNLQLVLLLLAVVSVPWMLVPKPFILKKQHEARHGVESYTPLESTDESLQVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLMAWGYNNVIILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFSLLDDEE* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00622 818 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Phac11g00622 818 PIRSF ATP6V0A1 11 818 IPR026028 GO:0000220|GO:0046961
Phac11g00622 818 Coils Coil 101 128 - -
Phac11g00622 818 PANTHER VACUOLAR PROTON ATPASES 15 815 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00622 Phac-Chr11 4149969 4162783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00622 13 818 Primary Pumps ATPases(2) AT4G39080 77.723 0.0 1308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00622 K02154 - gmx:100783125 1513.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00622 11 4149969 4162783 Phac11g00622 11 4149969 4162783 ECH