Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00621 ATGAAAAGAGAAGGTGTTGTGTTGTCGTTCTCTCTTCTTCTTCTTCTCTGGCTGCCGCTATGCTTCCAAATATGTTTGGGAGTTGATACTCTGAAGGCTACCGAGAAGATAACTCACCGAGGAAACCTTGTTTCATCAAACGCCACATTTGAGCTGGGTTTCTTTTCTCCTCCTGGTGTGAAGAATGGCGAGAAAAGATACCTGGGGATATGGTATCACGGGCTGGACCCACAAACAGTGGTGTGGGTTGCCAATAGAGATAAACCTGTTGCAGATTCCAGTGGAGTTTTTCGAATTGCGGAGGATGGAAATGTGGTGGTTGAATATGCATCCAAAAGGCACTGGTCCTCCGAACTTGAACCATCCTCGTCCACAAACAGAACATTGAAGCTCCTAGATTCGGGGAATCTAGTACTAATAGATGACTCTCAAACGACATACCCGTGGCAAAGCTTCCAACACCCAACAGACACGTTTCTTCCCGGCATGAAAATGGATGCGACTTTGTCGTTGACTTGTTGGAGAAACTCCGCTGACCCAACACCCGGGAGCTTCACCTTCAAGCAGATTCAACTGGAAGAGAAACAAAGCTTCCGTGTGGAAAATGAATCACAAATCTACTGGGCACTTGATGAACTTGACACAGAAGCGACTTCCCTGATGGTATTTAATTTGTTGAACAACGACACCTGGGCTACTAAATCGTACAATTATTCTAACAAAACACTCTTCGTATCAAAACCTATGTACAAAAAATCACGGCTTTTGATGAATTCTAGCGGGGAGATAGTGTTTCTGCAGTGGGATGAGAAAGAAACCCAATGGAATAAGAAATGGTCGGGGCCAGAGAACAAGTGTGACACATATAATTATTGCGGGAACTTCGGCGTATGTAACAGAGATAACTACAATCGGTGCAAATGTTTGCCAGGATTTTCTAATACTTTTCTTTCTAATGGAGAATCGAAGTCCCAAGGGTGTAGCAGAAAATCAACATCGTGTCCCAACAAGGACGTGACGTTCCTGAACTTAACCAACATAAAACTGCGCAACCCAGACCAAGAATTTTATACTCAAACAGAAGCAGAATGCCAAACCTCATGCATCAACGCGTGTTCCGAATGCCAGGCATATTCATTTAATAGTTCTATATACGGTGACCGTGGTTCATACTCGTGCAATATCTGGACGGGGAGTTTACCTTCTCTTCTTGAGAACTACCAGCGCGGTCGTGATCTTTCTATCTTGGTTAACACAGCAGATATAGCACCAACTGCAAAATCGTGTGAACCTTGCGGCACATATGCAATTCCTTATCCTCTCAGCACTGGGCCAAACTGTGGAGACCCCTCTTACAACAAGTTCAATTGCACCAAATCCACTGGCAAAGTTAGTTTCGTGATGCCCGGAGGAATATCATACCCAGTAACTTGGATCGATGAAGATACCAGAATGTTTTTCATTCAACCAGAATATTTCAATTCGTTTAATTCCAGTTTCAACCCTCAAAATGGCATTGATTTTCCGTTTAGTGTAACCAATTACATTGAAGGGGTAATACAAATCAATTGGCTACCACCGCGAGAACCGCCGTGTAGTAAGCTTATAGATTGCATCAATTGGCCAAATTCGACATGCAGAGCAACGGGGGTAGGAGAAAGTAGGTGTTATTGTGATTCAAACTATAATTGGAATAACACAATTATGAGATGCACCCGAGAAGCACCATCAGGAAATCATTCAACCCGACGGAAATTGATTCTTTTAGTAACTCTTGGTTCCCTGGCTACTGTGGCATGCATAACAGCATTTGGCATTGTGTGGAAAAAGAAAAAGGCCCGTAAGCGTGATCGCGCAAGCACCCGAATTCAGGAGAGCTTGTATGAGAGTGAAAGGCATGTGAAAGGTCTGATTGGTTTAGGAAGTTTAGAAGAAAAAGACATCGAAGGCATTGAAGTGCCCTGTTACACTTTTGCAAGCATTCTCGCAGCTACAGATAATTTCTCAGACTCTAACAAGCTTGGAAGAGGAGGTTATGGACCTGTTTATAAGGGAATGTTTCCTGGTGGTCAAGAAATAGCTGTAAAGAGACTTTCAAGTGTTTCCACTCAAGGCCTACAAGAATTCAAGAATGAGGTTATTTTGATTGCCAAACTTCAACATCGGAACCTGGTCAGACTGAGGGGCTACTGCATAAAAGGGGTTGAAAAAATCTTACTTTATGAATACATGCCAAACAAGAGCTTGGACTCATTTATATTTGACCGGAGTCGAACTATACTATTGGATTGGCCAATGCGGTTTGAGATAATTGTGGGCATTGCACGAGGCATGCTCTACCTTCACCAAGACTCCAGATTGAGAGTGATTCATAGAGACCTGAAAACCAGCAATGTTCTTCTAGACGAGGAAATGAATCCAAAGATATCAGATTTTGGCCTTGCAAAAATATTTGGAGGAAAAGAAACTGAAGCAAGTACAGAGAGAGTGGTGGGAACCTTTGGATACATGGCTCCAGAGTACGCTTTGGATGGATTTTTTTCAGTCAAATCTGATGTTTTCAGCTTTGGAGTAGTCCTACTAGAGATTCTTAGTGGGAAGAAGAACACAGGATTCTACGAGTCCAAACAAATTTCTAGCCTTTTGGGTTATGCATGGAATTTATGGTCAAGGAACAAGCTATTGGATTTAATGGATTCGTGCCTTGGTGAAACATGCAACAAAAATCAATTCATTAAGTGTGCAGTTATTGGGCTATTATGCACACAAGATGAACCAATTGATCGACCCACTATGTCAAATATTTTATACATGCTTGACATAGAGACAACAACCATGCCAATTCCCAGACAACCAACATTTTTTATGACCAAGCGTTATTCTAGCTCAGCTTCCTCTTCGACCAATCCAGAAATAAGCTTGCATCTTGACACCAGTTATAAACAAGGTCGATAG 2955 0.4234 MKREGVVLSFSLLLLLWLPLCFQICLGVDTLKATEKITHRGNLVSSNATFELGFFSPPGVKNGEKRYLGIWYHGLDPQTVVWVANRDKPVADSSGVFRIAEDGNVVVEYASKRHWSSELEPSSSTNRTLKLLDSGNLVLIDDSQTTYPWQSFQHPTDTFLPGMKMDATLSLTCWRNSADPTPGSFTFKQIQLEEKQSFRVENESQIYWALDELDTEATSLMVFNLLNNDTWATKSYNYSNKTLFVSKPMYKKSRLLMNSSGEIVFLQWDEKETQWNKKWSGPENKCDTYNYCGNFGVCNRDNYNRCKCLPGFSNTFLSNGESKSQGCSRKSTSCPNKDVTFLNLTNIKLRNPDQEFYTQTEAECQTSCINACSECQAYSFNSSIYGDRGSYSCNIWTGSLPSLLENYQRGRDLSILVNTADIAPTAKSCEPCGTYAIPYPLSTGPNCGDPSYNKFNCTKSTGKVSFVMPGGISYPVTWIDEDTRMFFIQPEYFNSFNSSFNPQNGIDFPFSVTNYIEGVIQINWLPPREPPCSKLIDCINWPNSTCRATGVGESRCYCDSNYNWNNTIMRCTREAPSGNHSTRRKLILLVTLGSLATVACITAFGIVWKKKKARKRDRASTRIQESLYESERHVKGLIGLGSLEEKDIEGIEVPCYTFASILAATDNFSDSNKLGRGGYGPVYKGMFPGGQEIAVKRLSSVSTQGLQEFKNEVILIAKLQHRNLVRLRGYCIKGVEKILLYEYMPNKSLDSFIFDRSRTILLDWPMRFEIIVGIARGMLYLHQDSRLRVIHRDLKTSNVLLDEEMNPKISDFGLAKIFGGKETEASTERVVGTFGYMAPEYALDGFFSVKSDVFSFGVVLLEILSGKKNTGFYESKQISSLLGYAWNLWSRNKLLDLMDSCLGETCNKNQFIKCAVIGLLCTQDEPIDRPTMSNILYMLDIETTTMPIPRQPTFFMTKRYSSSASSSTNPEISLHLDTSYKQGR* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00621 984 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 178 IPR036426 -
Phac11g00621 984 Pfam D-mannose binding lectin 79 167 IPR001480 -
Phac11g00621 984 SMART serkin_6 668 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00621 984 CDD EGF 286 313 - -
Phac11g00621 984 CDD STKc_IRAK 674 940 - -
Phac11g00621 984 SMART blect_4 34 155 IPR001480 -
Phac11g00621 984 Gene3D Phosphorylase Kinase; domain 1 642 743 - -
Phac11g00621 984 Gene3D Transferase(Phosphotransferase) domain 1 744 947 - -
Phac11g00621 984 Pfam PAN-like domain 334 400 IPR003609 -
Phac11g00621 984 ProSiteProfiles Bulb-type lectin domain profile. 28 152 IPR001480 -
Phac11g00621 984 Gene3D - 26 153 IPR036426 -
Phac11g00621 984 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 114 962 - -
Phac11g00621 984 ProSiteProfiles EGF-like domain profile. 282 318 IPR000742 -
Phac11g00621 984 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 744 947 - -
Phac11g00621 984 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 635 743 - -
Phac11g00621 984 FunFam Receptor-like serine/threonine-protein kinase SD1-8 23 152 - -
Phac11g00621 984 ProSiteProfiles PAN/Apple domain profile. 334 420 IPR003609 -
Phac11g00621 984 SUPERFAMILY Protein kinase-like (PK-like) 654 972 IPR011009 -
Phac11g00621 984 CDD B_lectin 43 155 IPR001480 -
Phac11g00621 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Phac11g00621 984 ProSiteProfiles Protein kinase domain profile. 668 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00621 984 Pfam Protein tyrosine and serine/threonine kinase 671 936 IPR001245 GO:0004672|GO:0006468
Phac11g00621 984 Pfam S-locus glycoprotein domain 241 314 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00621 Phac-Chr11 4140732 4145028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00621 661 954 Receptor kinase-like Gene Family AT4G23230 59.864 9.33e-122 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g00621 PK_Tyr_Ser-Thr 7.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00621 - - vun:114185132 1573.91