Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00591 ATGGAAGTTGCGGCGGCGAAAGCGCTCAAACCGAGCTTGCGGACGGAGTTCATTTTCCCGCAAGCAATCTGCGACGAGATTTTGTGTTTCAACGCGAACAACATTGTTGTCGGCGAAGATTTCTCCGTCGACGACCTTCTTGACTTTTCCAACGGCGAATTCCAGCAGCTTGGAAAGGATTTCGACGTCTGCGAGGAAGAGGAAGACGAGGAAAAGGACAGCAGCTCCGGTTCCTTGCAGGACCGAATCGAAGACGACAGCAATTCCAATTCCGCCGCCTGCGGCGGCGGCGACTCCGTCTTTGCCGGAGAATTGTCAGTTCCTGCGGATGATGTGGCGGACCTGGAGTGGGTTTCTCACTTTGTAGATGATTCTCTCCCTGAGCTATCTCTATTGTACCCTGTCCCTGCCGAGAAAACAAGGGCATGGACCGAACCAGAACCTAGACCGGGCCGGGCCCAAACGGCTACGGTTCCCAAAAGGTTGAGAACCGAAAAGAGTAGAAAGCCCAACGCTCGCGTGTGGTCTTTTACGGTGTCGCCGCTATTTTCGTGTTCTCCGGTGGAGGCTGGCGTTGAGTTTGGTGAACCAATGGCTAAAAAGCAGAAGAAAAAGGCTGAGGCCCAAAGTGGAGCTCAGTTTCAGCGACGGTGCAGCCACTGCCAGGTGCAGAAAACGCCGCAGTGGAGGACCGGCCCACTGGGGCCCAAAACACTCTGCAACGCTTGCGGAGTTCGGTTCAAGTCCGGTCGGCTTTTTCCAGAGTATAGACCGGCCTGTAGCCCAACTTTCTCTGGCGAGATTCACTCAAATAGCCACCGGAAGGTGTTGGAGATGAGGCGAAGAAAGGAGACCGCAGAACCGGAAACCGGTTCAGACCGGATTCAACTGGTCCCAAGCTGTTGA 906 0.5486 MEVAAAKALKPSLRTEFIFPQAICDEILCFNANNIVVGEDFSVDDLLDFSNGEFQQLGKDFDVCEEEEDEEKDSSSGSLQDRIEDDSNSNSAACGGGDSVFAGELSVPADDVADLEWVSHFVDDSLPELSLLYPVPAEKTRAWTEPEPRPGRAQTATVPKRLRTEKSRKPNARVWSFTVSPLFSCSPVEAGVEFGEPMAKKQKKKAEAQSGAQFQRRCSHCQVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSGEIHSNSHRKVLEMRRRKETAEPETGSDRIQLVPSC* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00591 301 SMART GATA_3 212 266 IPR000679 GO:0006355|GO:0043565
Phac11g00591 301 PIRSF Txn_fac_GATA_plant 1 300 IPR016679 GO:0003677|GO:0005634|GO:0045893
Phac11g00591 301 ProSitePatterns GATA-type zinc finger domain. 218 243 IPR000679 GO:0006355|GO:0043565
Phac11g00591 301 ProSiteProfiles GATA-type zinc finger domain profile. 216 248 IPR000679 GO:0006355|GO:0043565
Phac11g00591 301 Gene3D - 209 286 IPR013088 GO:0006355|GO:0008270
Phac11g00591 301 CDD ZnF_GATA 217 274 IPR000679 GO:0006355|GO:0043565
Phac11g00591 301 PANTHER GATA TRANSCRIPTION FACTOR 32 291 - -
Phac11g00591 301 MobiDBLite consensus disorder prediction 280 301 - -
Phac11g00591 301 MobiDBLite consensus disorder prediction 142 167 - -
Phac11g00591 301 FunFam GATA transcription factor 207 293 - -
Phac11g00591 301 Pfam GATA zinc finger 218 251 IPR000679 GO:0006355|GO:0043565
Phac11g00591 301 MobiDBLite consensus disorder prediction 66 94 - -
Phac11g00591 301 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 211 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00591 Phac-Chr11 3976442 3978244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00591 8 300 C2C2-Gata Transcription Factor Family AT5G66320 39.766 6.77e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac11g00591 GATA 3.4e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00591 - - gmx:100776188 438.728