Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00584 ATGCGAACCCTTTGCGACGTTTGCGAGAGCGCCGCTGCCATTCTCTTCTGCGCCGCCGATGAGGCTGCTCTCTGCTTTGCTTGTGACCAAAAGATCCATATGTGTAACAAACTTGCTAGTAGACACATTCGGGTTGGCCTTGCTGACCCCACTGATGTTCCACGCTGTGACATATGTGAAAATGCGCCTGCTTTCTTTTACTGTGAGATAGATGGTAGTTCGCTGTGTCTGCAATGTGATATGATCGTGCATGTTGGTGGTAAAAGAACTCACGAAAGATATCTTCTATTGAGGCAAAGAGCTGAGTTTCCAGGAGATAAACCTGCCCAAATGGAAGAACTAGGGCTGCAACCACTGGATCAAAATGAATTTAGGAGGGATGAAAGTCAGTCCCTCAAGCTAAAAACAAGAGACAGTCAGCAAAATCACAGTATCTTACCTGTTCCAAGACAAGAAAATAATATTGATGGTCATAGAAAAATGGATAAAAAGTTAATTGATCTCAACACCAGGCCATTGCGGTTAAATGGACCAACACCAAACAACCAGGGTATGGATATTTTAAGAGGCAATAATCATGAATTTGCAAGTGTGCCACCAGTTGAATCCTACAAACAAGGGGCTGAGAAGCAATAA 636 0.4355 MRTLCDVCESAAAILFCAADEAALCFACDQKIHMCNKLASRHIRVGLADPTDVPRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHERYLLLRQRAEFPGDKPAQMEELGLQPLDQNEFRRDESQSLKLKTRDSQQNHSILPVPRQENNIDGHRKMDKKLIDLNTRPLRLNGPTPNNQGMDILRGNNHEFASVPPVESYKQGAEKQ* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00584 211 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 142 - -
Phac11g00584 211 MobiDBLite consensus disorder prediction 174 188 - -
Phac11g00584 211 MobiDBLite consensus disorder prediction 120 189 - -
Phac11g00584 211 FunFam B-box zinc finger protein 19 2 92 - -
Phac11g00584 211 SMART bboxneu5 1 47 IPR000315 GO:0008270
Phac11g00584 211 SMART bboxneu5 51 96 IPR000315 GO:0008270
Phac11g00584 211 Gene3D Classic Zinc Finger 2 95 - -
Phac11g00584 211 MobiDBLite consensus disorder prediction 153 169 - -
Phac11g00584 211 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Phac11g00584 211 MobiDBLite consensus disorder prediction 120 134 - -
Phac11g00584 211 Pfam B-box zinc finger 53 92 IPR000315 GO:0008270
Phac11g00584 211 CDD Bbox1_BBX-like 56 96 - -
Phac11g00584 211 MobiDBLite consensus disorder prediction 135 149 - -
Phac11g00584 211 CDD Bbox1_BBX-like 4 47 - -
Phac11g00584 211 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00584 Phac-Chr11 3928961 3932088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00584 1 210 C2C2-CO-like Transcription Factor Family AT4G38960 56.667 4.77e-81 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Phac11g00584 zf-B_box 3.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00584 - - gmx:100527369 393.66