Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00570 ATGGCTTCTTTCAGCGGCGATGAGACGGCACCGTTTTTCGGCTTCCTTGGAGCCGCAGCTGCGCTCGTCTTCTCCTGTATGGGAGCTGCCTATGGCACAGCAAAGAGTGGTGTGGGCGTGGCTTCGATGGGTGTGATGAGACCGGAGCTGGTGATGAAGTCTATTGTTCCTGTTGTTATGGCTGGAGTTTTGGGTATTTATGGTCTTATTATTGCTGTTATTATCAGTACTGGCATTAATCCCAAGGCCAAATCTTATTACCTCTTTGATGGTTATGCACATCTCTCCTCTGGTCTTGCCTGTGGGCTGGCTGGGCTCTCTGCTGGCATGGCTATTGGCATTGTTGGTGATGCTGGTGTTAGAGCCAACGCACAGCAGCCAAAGCTTTTTGTTGGAATGATTCTCATCCTCATCTTTGCTGAAGCTCTTGCCCTGTATGGTCTCATTGTTGGTATTATCCTGTCCTCTCGTGCTGGTCAGTCTAGAGCTGATTAA 495 0.4929 MASFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD* 165
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00570 164 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 160 - -
Phac11g00570 164 NCBIfam V-type ATPase subunit C 12 120 IPR011555 GO:0033179|GO:0046961|GO:1902600
Phac11g00570 164 Pfam ATP synthase subunit C 96 154 IPR002379 GO:0015078|GO:0033177|GO:1902600
Phac11g00570 164 Pfam ATP synthase subunit C 16 75 IPR002379 GO:0015078|GO:0033177|GO:1902600
Phac11g00570 164 PRINTS Vacuolar ATP synthase 16kDa subunit signature 29 53 IPR000245 GO:0033179|GO:0046961|GO:1902600
Phac11g00570 164 PRINTS Vacuolar ATP synthase 16kDa subunit signature 106 132 IPR000245 GO:0033179|GO:0046961|GO:1902600
Phac11g00570 164 PRINTS Vacuolar ATP synthase 16kDa subunit signature 133 156 IPR000245 GO:0033179|GO:0046961|GO:1902600
Phac11g00570 164 PRINTS Vacuolar ATP synthase 16kDa subunit signature 55 79 IPR000245 GO:0033179|GO:0046961|GO:1902600
Phac11g00570 164 FunFam V-type proton ATPase proteolipid subunit 10 161 - -
Phac11g00570 164 Gene3D - 10 161 IPR035921 -
Phac11g00570 164 CDD ATP-synt_Vo_c_ATP6C_rpt1 12 79 - -
Phac11g00570 164 SUPERFAMILY F1F0 ATP synthase subunit C 86 155 IPR035921 -
Phac11g00570 164 CDD ATP-synt_Vo_c_ATP6C_rpt2 88 155 - -
Phac11g00570 164 SUPERFAMILY F1F0 ATP synthase subunit C 12 76 IPR035921 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac11g00570 Phac-Chr11 3889764 3891744 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00570 1 164 Primary Pumps ATPases(2) AT2G16510 98.171 2.00e-111 312
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00570 K02155 - pda:103718497 285.804
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00570 11 3889764 3891744 Phac11g00570 11 3889764 3891744 ECH