Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00564 ATGGGTGAAAATGAAGAAGCTACCAATGACATGATGCAGAGGCTTCACTGTTCTTCGTTTCTGAAACAGCCGTTGAACATGGAGCAACTCAGTATCCCGCAGTTCAATCCCTCGCAAATGCGCGCCAGGCATCAGCATCAGCATCAGTTCGACGGTGGGAACAGTAACAAGCGCGCGGGTATACCACCTTCGCACCCGCACCAGATCCCGCCCATTTCGCCCTACTCTCAGATCCCGGTGACGCGTCAGCAGCAAATGGGGTCGCACAACATTTCCCCTACGCCCACCCACACGCGATCACTCTCGCAGCCTTCCTTTTTCTCCCTCGACTCCCTCCCTCCCCTCAGCCCTTCCCCCTTCCGCGACTCCTCCTCTACATCTGTCTCGGAAGCTGCTGACGTGTCCATGGAAGATCGTGACGTCACTTCTCACTCCCTCTTGCCACCCTCACCTTTCGCCAGAACACTCAACACCTCAACCAACAGCAATTTGCCTTTACCCCCTCGCAAAGCGCATAGGCGCTCTAACAGTGATATTCCATTTGGGTTTTCCACCGTTTTGCAATCTTCGCCACCGCTTATTCCACTCCGGGGCAGAGAAAACCCCGTTTTGGCGAAACCTGCTCAATTGGTCAAAAGAGAAACACCGTGGGACAGGGGTGTTGACCACAGTAATGTAGAGGGATCCGGGGAGAAGAAATCCCCGGAAGGGGAAGTTGTGGATGATCTTTTCTCTGCTTACATGAATTTAGATAGCTTTGATGCGTTGAACTCTTCTGGAACCGATGATAAAAACGGGACTGAAAATCGCGATGATTTGGATAGTAGAGCGAGTGGGACCAAGACTAATGGTGGTGACAGTAGTGATAATGAAGCTGAGAGTAGTGTTAATGAGAGTGGGGATGGTGTGGTGAGGCAGGGAGGGAGTGAGAAGAGGGAAGGGATGAAGAGGAGTGCGGGTGGGGAGATTGCACCCACTACCAGGCACTATAGGAGTGTCTCCATGGATAGTTTCATTTCGAAGTTGAACTTCGGTGATGAGTCGCCGAAGCTGCCACCGTCGCCGGGGCCGAGAACTGGTTTGATTTCGCCTGCCGGTGGAGTTGATGGCAATTCATCGGCCTTCAGCTTGGAGTTTGGAAATGGGGAGTTTAGTGGGCCTGAATTGAAGAAAATTATGGCCAATGAAAAACTTGCTGAGATTGCCTTGACCGATCCAAAGCGTGCAAAAAGGATTTTGGCTAACCGGCAATCGGCTGCACGATCCAAAGAGCGGAAGATGCGGTACATATCCGAGCTAGAGCATAAGGTTCAGACACTACAGACGGAAGCCACCACACTATCTGCACAGCTTACTCTGTTACAGAGAGATTCTGCTGGACTCACTAATCAGAATAGCGAGTTGAAATTTCGCCTTCAATCCATGGAACAACAAGCAAAGCTCCGAGATGCTCTAAATGAGGCTCTTACTGCTGAGGTTCAAAGACTAAAGATTGCTACAGCTGAACTGAGTGGGGATTCACATGGTTCTAGCTGTTTGATTCCTCAACATTCTGTCAACCCTCTGATGTTCCAGCAGCAGCAGCCTCCCACTGCATCCCAACAAAACATTCATCTTCAACAGCAGCAGCAGCACCAGAATGGTAATGGCAACTCAAATTCCGACATAAAACAATAG 1677 0.5051 MGENEEATNDMMQRLHCSSFLKQPLNMEQLSIPQFNPSQMRARHQHQHQFDGGNSNKRAGIPPSHPHQIPPISPYSQIPVTRQQQMGSHNISPTPTHTRSLSQPSFFSLDSLPPLSPSPFRDSSSTSVSEAADVSMEDRDVTSHSLLPPSPFARTLNTSTNSNLPLPPRKAHRRSNSDIPFGFSTVLQSSPPLIPLRGRENPVLAKPAQLVKRETPWDRGVDHSNVEGSGEKKSPEGEVVDDLFSAYMNLDSFDALNSSGTDDKNGTENRDDLDSRASGTKTNGGDSSDNEAESSVNESGDGVVRQGGSEKREGMKRSAGGEIAPTTRHYRSVSMDSFISKLNFGDESPKLPPSPGPRTGLISPAGGVDGNSSAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKIATAELSGDSHGSSCLIPQHSVNPLMFQQQQPPTASQQNIHLQQQQQHQNGNGNSNSDIKQ* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00564 558 MobiDBLite consensus disorder prediction 212 237 - -
Phac11g00564 558 Gene3D - 406 481 - -
Phac11g00564 558 MobiDBLite consensus disorder prediction 278 302 - -
Phac11g00564 558 MobiDBLite consensus disorder prediction 74 132 - -
Phac11g00564 558 MobiDBLite consensus disorder prediction 148 166 - -
Phac11g00564 558 Coils Coil 423 478 - -
Phac11g00564 558 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 105 553 - -
Phac11g00564 558 Pfam bZIP transcription factor 407 465 IPR004827 GO:0003700|GO:0006355
Phac11g00564 558 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 405 468 IPR004827 GO:0003700|GO:0006355
Phac11g00564 558 MobiDBLite consensus disorder prediction 525 558 - -
Phac11g00564 558 MobiDBLite consensus disorder prediction 38 177 - -
Phac11g00564 558 MobiDBLite consensus disorder prediction 256 329 - -
Phac11g00564 558 MobiDBLite consensus disorder prediction 344 367 - -
Phac11g00564 558 FunFam probable transcription factor PosF21 406 459 - -
Phac11g00564 558 SMART brlzneu 403 467 IPR004827 GO:0003700|GO:0006355
Phac11g00564 558 SUPERFAMILY Leucine zipper domain 407 458 IPR046347 GO:0003700|GO:0006355
Phac11g00564 558 MobiDBLite consensus disorder prediction 205 237 - -
Phac11g00564 558 CDD bZIP_plant_RF2 408 459 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00564 Phac-Chr11 3851234 3855468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00564 1 526 bZIP Transcription Factor Family AT4G38900 58.845 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac11g00564 bZIP_1 2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00564 - - gmx:778145 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00564 11 3851234 3855468 Phac11g00564 11 3851234 3855468 ECH