Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00554 ATGCCCTGCAAACATTTAGGACCAACTCAAATCCTTCCCATCCAAAAGAATTCAAAATTCAAAAGCTTATTTCAAGAATTTGCTAAACTGTTCTGTTGTCAAGTTTCTAATCCAGTCAAAACAACAATGGGCTTTCGTTTACCTGGTACCAGAAAGACATTATTTGCAGCAAATCAAGCATCTTCAAAAGTGGTGGATGCGCCCAAGGGCTATCTTGCTGTCTATGTTGGAGAGAAAATGAAGGGGTCCATGATCCCTGTGTCATACTTGAACCAACCTTCATTCCAAGATTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTTACAATTCCCTGCAGCGAAGATGTATTCCAACGTATAATTTCTGGCTTGAATGGACAATAA 405 0.4049 MPCKHLGPTQILPIQKNSKFKSLFQEFAKLFCCQVSNPVKTTMGFRLPGTRKTLFAANQASSKVVDAPKGYLAVYVGEKMKGSMIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQRIISGLNGQ* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00554 134 Pfam Auxin responsive protein 54 129 IPR003676 GO:0009733
Phac11g00554 134 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 60 129 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00554 Phac-Chr11 3810039 3811037 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00554 66 134 Calmodulin-binding Proteins AT3G43120 44.928 2.30e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00554 K14488 - gmx:100820621 165.236