Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00548 ATGGGTTTTCTATTACGTGGTATCAGGAAGGCATCCCTTTCTACAATCCAAGCATCTTCAAAAGTTGTGGAAGTGCCAAAAGGCTACCTTGCAGTCTATGTTGGAGAGAAAATGAAGCGCTTCATGATTCCTGTATCATACTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGCTGAGGAAGAATTTGGGTATGATCATCCACTGGGTGGTCTCACAATTCCTTGTGGAGAAGATGTGTTCTTAGATATCACTTCTCGCTTGAATAGGTGCTAA 279 0.4122 MGFLLRGIRKASLSTIQASSKVVEVPKGYLAVYVGEKMKRFMIPVSYLNQPSFQDLLSQAEEEFGYDHPLGGLTIPCGEDVFLDITSRLNRC* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00548 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 15 89 IPR003676 GO:0009733
Phac11g00548 92 Pfam Auxin responsive protein 17 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00548 Phac-Chr11 3796979 3797257 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00548 14 82 Calmodulin-binding Proteins AT3G43120 50.725 2.30e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00548 K14488 - gmx:100795597 160.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00548 11 3796979 3797257 Phac11g00548 11 3796979 3797257 ECH