Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00510 ATGGCAGTTGAAAAGAGGTTTGTTTTGGTTGGGATTAGAATTGATTGCCATTGTAGACAGCTTCTCAACTGGGCACTTGTCAAAGTTGCTGAACCAGGGGATTGTGTTGTAGCAATCCATGTTGTTAAAAATCCAGATCATGTTTCCAAAAGCAATAATCTGATAGATGACTATTTAGAAGTTTATGAAGGGCTATGTGGTGTTAAGAAGGTAGATCTCAGTGGTCAAATCTTCTATGGAAGATCCGTTCGAAACATTCTTGTTAGAGAAGCAAAAAAACATGATGCTCTGGCTCTAGTGGTAGGGGGTCGAGCTGGCTTAGCTAAATATTGCGCCAAACAACTACCACTCACCACCAATGTTTTAGCCATCCAAGGCTCAAGGATTGTCTATAGGAGTTGCACCAACGAACATCAACCAGGTGGTCTTATAATGGATCCAAGACCAAGCTTAACAACCATAGGAAAAAACTCGAGTGACAGAGTAAACCAGTCTACATTTGGGGACTCCACCCTGGAGATTGAGAAATCAGAAACCAAAAATTGCTTAGAATTGAAGGAAGAAGCATTTAACGGATTGGGAAAGGCTAAGTCAAGGTCAATATCCATGTTTGCAGGTGATTCAGCTGAGCAGAAGCTCGGGTGGCCTCTACTCCGAGGAGCCAACTCGGGAACGTCACAAACCCATCATGCAAGGGATATGCCAGTAGTACAATGGGTAATGACCTTACCAGATCGTTCACCGTGTAAAAGTCCCTGGTCTTCTTCCTCTGAGGAAAATCCATTTGAAAGGAGCATCAGCGATATTGATGATGAGAGCTCCAAATTTTCTTCAGCTCCATCTATTGATCTACCAAATGGCCTAGAGGAGATGCTACGCGTAAATTCAATCGACTGCAAATGGTTCAGCCTTGAAGTTCTGCAGTCTTGCACTGGACAATTTTCTTCAGAAAACTTGGTTGGGAAAGGAGGGAGCAATCGTGTGTACAAAGGAGTCCTGCCTGATGGAAAGCCTGTGGCAGTTAAAGTATTGCATTCATCAAAAGAAGCCTGGAAAGATTTTGCCCTTGAGGTGGAAATAATATCCCCATTGAGGCACAAAAACATTACCCCTCTACTTGGGATTTGCACAGAGAACAATACTTTAATCTCCGTTTATGATTATTTGCCCCAGGGCAGCTTAGAGGCAAATCTGCATGGAAAGAGCAAATTGTCATGGGAAATGAGATTTAATGTGGCAGTTAGGATCGCTGAAGCCCTCGATTACATACACAGGGAAGCTTTGAAGCCTGTTATACATAGAGATGTCAAGTCTTCTAACATTCTTCTTACCCAAGGGTTTGAACCTCTGTTATCTGATTTCGGACTTGCAACATGGGGACCAACAACTTCATCCTTTTTGACCCAAGATGTAGTAGGAACATTTGGTTATCTTGCTCCTGAATACTTCATGTATGGAAAGGTCAGTGACAAGATAGATGTTTATGCCTTTGGTATAGTTCTACTTGAACTAATATCAGGAAGGGAACCAATCAGCTCAGCAGCTTGCAAAGGACAGGAGAGCTTGATCGTGTGGGCAAAACCAATAATAGATAGTGGGGACATTAAAGGCTTATTGGACCCAGAATTAGAAGGGAAATATGATGAGGTACAATTGCAAAGAATGGTTATGGCAGCATCTTTATGCATCACACGGGCTGCTCGACTTCGTCCAAAACTGAATCAGATACTGAAGATCCTAAAAGGGGATGAGAAAGTTGAATATTTGCTGAACTCGCATGGGAACAATGAGGAGGATTCAGAAAATGGAGAAAACATTGATGATGAAGTGTATCCAAGTTCAAGTGCAGAGTTACACCTGAGTCTTGCTTTACTTGGTGTGGACGATGACAATACGTCACAAACTAGCACTGAGCTCAGCTATAGTGAGCACTTGAAAGAACAATGGAGCAGGTCATCAAGTTTCAATTAG 1971 0.4236 MAVEKRFVLVGIRIDCHCRQLLNWALVKVAEPGDCVVAIHVVKNPDHVSKSNNLIDDYLEVYEGLCGVKKVDLSGQIFYGRSVRNILVREAKKHDALALVVGGRAGLAKYCAKQLPLTTNVLAIQGSRIVYRSCTNEHQPGGLIMDPRPSLTTIGKNSSDRVNQSTFGDSTLEIEKSETKNCLELKEEAFNGLGKAKSRSISMFAGDSAEQKLGWPLLRGANSGTSQTHHARDMPVVQWVMTLPDRSPCKSPWSSSSEENPFERSISDIDDESSKFSSAPSIDLPNGLEEMLRVNSIDCKWFSLEVLQSCTGQFSSENLVGKGGSNRVYKGVLPDGKPVAVKVLHSSKEAWKDFALEVEIISPLRHKNITPLLGICTENNTLISVYDYLPQGSLEANLHGKSKLSWEMRFNVAVRIAEALDYIHREALKPVIHRDVKSSNILLTQGFEPLLSDFGLATWGPTTSSFLTQDVVGTFGYLAPEYFMYGKVSDKIDVYAFGIVLLELISGREPISSAACKGQESLIVWAKPIIDSGDIKGLLDPELEGKYDEVQLQRMVMAASLCITRAARLRPKLNQILKILKGDEKVEYLLNSHGNNEEDSENGENIDDEVYPSSSAELHLSLALLGVDDDNTSQTSTELSYSEHLKEQWSRSSSFN* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00510 656 MobiDBLite consensus disorder prediction 248 262 - -
Phac11g00510 656 Pfam Protein kinase domain 316 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00510 656 SMART serkin_6 314 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00510 656 Gene3D Phosphorylase Kinase; domain 1 285 388 - -
Phac11g00510 656 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 8 104 - -
Phac11g00510 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Phac11g00510 656 FunFam Putative receptor-like serine/threonine-protein kinase 389 596 - -
Phac11g00510 656 PANTHER OS08G0249100 PROTEIN 188 598 IPR046958 -
Phac11g00510 656 SUPERFAMILY Protein kinase-like (PK-like) 296 580 IPR011009 -
Phac11g00510 656 CDD USP_Like 8 109 - -
Phac11g00510 656 ProSiteProfiles Protein kinase domain profile. 314 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00510 656 MobiDBLite consensus disorder prediction 248 281 - -
Phac11g00510 656 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 283 388 - -
Phac11g00510 656 Gene3D Transferase(Phosphotransferase) domain 1 389 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00510 Phac-Chr11 3667384 3672057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00510 301 591 Trihelix Transcription Factor Family AT5G38560 41.333 1.39e-70 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phac11g00510 Pkinase 1.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00510 - - gmx:100789189 1019.61