Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00493 ATGTGTAGAACGATCTCGTTTCTCGTTCACCCACGAGTCCTCCTTCTCTTCCTTGTTCTCTCAATTTTTCTCATTTTCACGTATACTGGTTCTACTACTACTTATGGTTCTACTACTCCAAAACTGGTTGTTGAGGAGAAAATAGAAGAGGTTCATGAAATTACACATAGAGTATTCTTGGACATTGATATTGATAAACAGCGTTTAGGTAGGATAGTGATTGGTTTATATGGCCAAGTTGTACCGAAAACTGTGGAAAATTTTATAGCTTTGTGTACAGGGCGGAAAGAAAAGAGTGAAAATGACTTAAAGCTTCATTACAAAGGAACACCATTTCATCGGATAGTATCTGGTTTTGTGATTCAGGGTGGAGACATTGTTCATCATGATGGTAAAGGGTCTGAATCTATATATGGTGGCACCTTTCCTGATGAGAATTTCAAGATTAAACATTCTCACGCTGGCGTTGTCTCTATGGCAAATTCAGGACCTGACTCCAATGGCTCACAGTTTTTCGTTACCACGGTGAAGGCCAGTTGGAAAAACTATTAA 552 0.3895 MCRTISFLVHPRVLLLFLVLSIFLIFTYTGSTTTYGSTTPKLVVEEKIEEVHEITHRVFLDIDIDKQRLGRIVIGLYGQVVPKTVENFIALCTGRKEKSENDLKLHYKGTPFHRIVSGFVIQGGDIVHHDGKGSESIYGGTFPDENFKIKHSHAGVVSMANSGPDSNGSQFFVTTVKASWKNY* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00493 183 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 57 181 - -
Phac11g00493 183 FunFam Peptidyl-prolyl cis-trans isomerase CYP19-2 50 183 - -
Phac11g00493 183 Gene3D - 43 183 IPR029000 -
Phac11g00493 183 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 91 IPR002130 GO:0000413|GO:0003755
Phac11g00493 183 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 112 124 IPR002130 GO:0000413|GO:0003755
Phac11g00493 183 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 155 170 IPR002130 GO:0000413|GO:0003755
Phac11g00493 183 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 170 182 IPR002130 GO:0000413|GO:0003755
Phac11g00493 183 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 107 124 IPR020892 GO:0003755|GO:0006457
Phac11g00493 183 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 62 181 IPR002130 GO:0000413|GO:0003755
Phac11g00493 183 SUPERFAMILY Cyclophilin-like 52 182 IPR029000 -
Phac11g00493 183 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 59 183 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00493 Phac-Chr11 3532882 3536787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00493 70 183 U-box Gene Family AT5G67530 47.826 1.84e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00493 - - gmx:100800775 300.441