Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00487 ATGGCTTCCCTCTATGATGTGCTTGGAATTTCAATTGGTGCAAGCTGCGTGGAAATAAAGGCTGCTTACAGAAAGCTAGCAAGAACATACCATCCTGATGTTGTGGCCATGAATCAGAAGGAAAGCTCAGCTCACCAATTCATGATAATCCATTCAGCATACTCAACGTTGTCTGATCCAGAAAAGAGAGCACAATATGACACAGAAATCTGTAGATACAGAAGATCAGCAAACATGGCTTCCATGGCAGGAAGAAATCACACATTTTCCTGCGCTGGAGGAAGTGGGAGGAAATGGGAAACGGATCAATGTTGGTAG 318 0.4371 MASLYDVLGISIGASCVEIKAAYRKLARTYHPDVVAMNQKESSAHQFMIIHSAYSTLSDPEKRAQYDTEICRYRRSANMASMAGRNHTFSCAGGSGRKWETDQCW* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00487 105 Pfam DnaJ domain 4 67 IPR001623 -
Phac11g00487 105 PRINTS DnaJ domain signature 42 62 IPR001623 -
Phac11g00487 105 PRINTS DnaJ domain signature 23 38 IPR001623 -
Phac11g00487 105 PRINTS DnaJ domain signature 5 23 IPR001623 -
Phac11g00487 105 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 2 105 - -
Phac11g00487 105 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Phac11g00487 105 SMART dnaj_3 2 62 IPR001623 -
Phac11g00487 105 SUPERFAMILY Chaperone J-domain 2 81 IPR036869 -
Phac11g00487 105 CDD DnaJ 5 59 IPR001623 -
Phac11g00487 105 Gene3D DnaJ domain 1 88 IPR036869 -
Phac11g00487 105 ProSiteProfiles dnaJ domain profile. 3 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00487 Phac-Chr11 3461651 3463066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00487 5 68 C2H2 Transcription Factor Family AT1G74250 44.118 8.08e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00487 - - gmx:100798520 178.333