Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00477 ATGATTTCACGTGAGAGTTCTGGCACTGTGTCCGTGAGTGTTGCGAGTGCGGAGGAGTTTCGAGACAGCAAAGGCAACCACTTTAACCACGAAGACGATTCCCAACCCCTTCTAGCTCTCAAATCCTCCATTGACGTTCTCCACAAGCTCCCATGGCGACAAGGAACCGACGTCTGCACCTGGGCAGGGGTCAGAGACTGCTTCAACGGAAGAGTCAGAAAGCTCGTCCTGGAACACTCCAACCTAACCGGTTCTCTCGATTCCAAGATCTTGAACCGTTTGGACCAGCTAAGAGTCCTAAGCTTCAAAGGAAACTCACTCTCCGGCCAAGTCCCTGACCTCTCCGCCCTGATCAACCTCAAATCGATTTTCCTCAGCAACAACAACTTCTCCGGCGAGTTCCCCTCCTCGCTCGCGCTACTCCACCGCGTCAAGGTCATTGTCCTGTCGCAAAACCACATCTCCGGCGACATTCCGGCGTCGCTAGTGAATCTCCGGCGACTCTACATCCTCTACCTGGAAGACAACGCGTTCACGGGAAGCATCCCGGGTTTCAATCAAACCAGCCTCAGGTATTTAAATGTCTCCAACAACCGGCTCTCCGGCGAGATTCCGGTGACCGCCGCCCTGATCCGGTTCAATGCGTCGTCGTTTTCAGGCAACCCGGGGCTCTGCGGGGAGAACATCCACCAACCGTGCAAAAACGGCAGCGTTTCGTTGGCGCCGTCGATAAGCCCCAGCCATCCGCTGGTCCCGGGAGGCACCGCGCCGGCATCGAACCGCGCGAAGCTGATAAAGATAATTGGAGGGTGCGTTGGTGGCGTTGTTTTTATTGTGGTGTGCATGGTTGTGGTGTGGGCGATTTGCAGGAAGCGGAAGACGAGGGTGGGTTCCGGAACGAGGAGCAAGGGCGGTGCTGAGGTGGGGGAGGGGGAGGGTGGTGCGGCGGGGAGTGGTGGAGGTGGCGGCGGAGACGGCGGGGATAGTAATAAAGAAGGGGGTTTTGCGTGGGAAGGTGAGGGTCTGGGGAAGCTGGTGTTCTGCGGCGGAGGTGATCGCGAGATGAGTTACAGTTTGGAGGATTTGCTGAAGGCTTCGGCGGAGACTCTGGGGAGGGGTATTATTGGAAGTACTTATAAGGCAGTTATGGAATCTGGGTTCATCGTCACTGTTAAGAGGTTGAAGGATGCTAGGTACCCTGGTTTGGAAGAGTTCAGAGCTCACATTCATGTTCTTGGGAGGCTCACCCACCCCAACTTGGTCCCACTCAGAGCTTATTTTCAGGCCAAGGAAGAACGTCTTTTGGTCTATGATTACTTTCCCAATGGCAGCCTCTTCTCCCTTATTCACGGATCAAAAACATCTGGCGGGGGAAAGCCTCTTCACTGGACATCCTGCCTTAAGATTGCGGAAGATCTAGCAACAGGCCTGCTCTATATCCACCAGAACCCCGGCATGACACATGGAAACCTTAAATCTTCTAACGTGTTGCTTGGTTCTGATTTTGAGTCATGTCTTACTGATTATGGTCTCACTGTGTTCCTAAATCCTGAATCAATGGATGAGCCTAGTGCCACTTCTTTGTTCTATAGAGCACCTGAATGCCGCAACTTTCAAAGGTCACAAACTCAACCAGCTGATGTATACAGCTTTGGGGTCCTTGTTCTAGAGCTTCTAACCGGCAAAACACCCTTCCAAGACCTTGTTCAGACGTATGGCTCAGACATACCTAGGTGGGTCAGGTCAGTGCGCGAAGAAGAGACAGAGTCAGGGGATGATCCTGCCTCAGGCAATGAAGCATCAGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCCATGGCATGTGTTTCACTGGTGCCAGAGAACAGGCCTACAATGAGAGAGGTTTTAAAGATGATAAAAGATGCAAGAGGGGAGGCACATGTCTCATCTAACAGTAGTGATCACTCCCCTGGTAGATGGTCAGATACTGTTCAAAGCTTTCCAAGGGAAGAACACCAGAGCATATGA 2010 0.5254 MISRESSGTVSVSVASAEEFRDSKGNHFNHEDDSQPLLALKSSIDVLHKLPWRQGTDVCTWAGVRDCFNGRVRKLVLEHSNLTGSLDSKILNRLDQLRVLSFKGNSLSGQVPDLSALINLKSIFLSNNNFSGEFPSSLALLHRVKVIVLSQNHISGDIPASLVNLRRLYILYLEDNAFTGSIPGFNQTSLRYLNVSNNRLSGEIPVTAALIRFNASSFSGNPGLCGENIHQPCKNGSVSLAPSISPSHPLVPGGTAPASNRAKLIKIIGGCVGGVVFIVVCMVVVWAICRKRKTRVGSGTRSKGGAEVGEGEGGAAGSGGGGGGDGGDSNKEGGFAWEGEGLGKLVFCGGGDREMSYSLEDLLKASAETLGRGIIGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIHVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGMTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPESMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKTPFQDLVQTYGSDIPRWVRSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIKDARGEAHVSSNSSDHSPGRWSDTVQSFPREEHQSI* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00477 669 Gene3D Phosphorylase Kinase; domain 1 351 439 - -
Phac11g00477 669 SUPERFAMILY Protein kinase-like (PK-like) 368 644 IPR011009 -
Phac11g00477 669 MobiDBLite consensus disorder prediction 640 669 - -
Phac11g00477 669 ProSiteProfiles Protein kinase domain profile. 364 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00477 669 Gene3D Transferase(Phosphotransferase) domain 1 440 656 - -
Phac11g00477 669 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 113 233 - -
Phac11g00477 669 Gene3D Ribonuclease Inhibitor 30 186 IPR032675 -
Phac11g00477 669 Pfam Leucine rich repeat 119 177 IPR001611 GO:0005515
Phac11g00477 669 Gene3D Ribonuclease Inhibitor 187 236 IPR032675 -
Phac11g00477 669 SUPERFAMILY L domain-like 34 227 - -
Phac11g00477 669 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 638 IPR046959 -
Phac11g00477 669 MobiDBLite consensus disorder prediction 643 669 - -
Phac11g00477 669 Pfam Leucine rich repeat N-terminal domain 31 65 IPR013210 -
Phac11g00477 669 Pfam Protein kinase domain 367 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00477 669 MobiDBLite consensus disorder prediction 296 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00477 Phac-Chr11 3390063 3395451 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00477 33 669 Receptor kinase-like Gene Family AT1G60630 61.705 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac11g00477 Pkinase 1.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00477 - - gmx:100809866 1068.53