Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00465 ATGAATAAAGAGAAACAAAAATTAAAGTGCAACACTTGTGTACTTATGGTAGAGCATGTGTTGGTTGACCGGCTGACGGAGTTTATAAGCATTGATTTGCAAGATACGAAGGATTCTCGTCGTCGTTTTGACAAAGCTGTGCATTCTTATGATCAGTCACGAGAGAAGTTTGTCTCTTTGAAGAAGAATACACCAGAAGATGTTGTAGCTGAATTAGAAGAGGATCTACAAAATTCAAAATCAACATTTGAAAAAAGCCGCTTCAATCTAGTAAACTCACTCATGAATATTGAAGCGAAAAAGAAGTATGAGTTCTTGGAGTCCATTAGTGCAATAATGGATGCTCATTTGAGATATTTTAAGCTGGGTTATGACTTACTAAGCCAAATGGAGCCCTATATTCACCAGGTGCTGACATATGCACAACAATCTAAAGAACTTGCTAATATTGAGCAAGATAAGCTTGCAAAACGGATTCAGGAATACAGAACACAGGCAGAGCTGGAGAATATACAAGTTTCTAGCAATTTTACCGAAACCATTCCAGGTTCTGAAGGCACCCATGTTGTAGGTTTGAACTCTTACAGAAGTTTAGATTCAGGGATGCTGTCTGCACCCAAAGGGGAGCTTCAAACAGTTAAACAAGGTTATCTGTTAAAACGGTCATCAGGCTCACGTGGAGATTGGAAACGGAGGTTCTTTGTACTTGATAACCAAGGGAATTTATATTATTACAGAGTGAAGGGTGTCAAACCCACGGGCTCTCAGGCATATAATTATGGTCGTTCTTATGAACAAAATAGTGGAATGTTTGGTAGATTCCGTTCAAAACACAACAGGGCTGCATCACTGAATGATGATATTTTAGATTGTTATACTATTGATCTATGCACATCAACTATAAAGATGGATGCAGAGGATACAGATCTACGACTTTGCTTCCGAATAATTTCTCCCTCAAAAACATTCACACTTCAGGCCGAAAATGAAGCTGCTAGGATGGACTGGGTTAACAAAATTACTGGAGCTATCACATCACTTTTTAATTCACAGTTTCTTCAACAGCCTCAATATGGTAGAGAGAATTCACAGAAAAAAAACTTACCACCAATTGGTGCTTCTTTGTCAAGTCAATCTGAGGATGGTCAGAAATCATTGAGAGATGACTTATATTCCAAGGAAGGGGGTAGTGTCTCTAAGATTTTAAGGGGAATTCCAGGGAATGATAAATGTGCTGAGTGCAGTGCTTCTGAACCAGAATGGGCATCTCTAAACCTTGGCATATTGCTATGTATTGAATGCTCTGGAGTGCATCGAAATCTTGGTGTTCATATCTCAAAGGTGAGGTCTATAACATTAGATGTTAGGGTGTGGGAAAATACCATTTTGGAGTTATTTGATAACTTAGGTAATGCTTATTGTAATTCTATATGGGAGGGCTTGCTTCTGCTTGATCATGAAAGGGTAGGTGAATTACATGTGCCTATTAAACCTTGCTCAACAGATGCCTTCCAAATCAAAGAGAAATACATCCAAGCAAAGTACGTAGAGAAATCACTAATAATCCGAGAAGAGGATATACCTGAGAATCCTTCAGTTTCCATAAAAATTTGGCAAGCAGTTCAGGCTGCAAATGTACGAGAAGTGTATCGCCTCATTGTTACATCAACATCAAATTTGATAAACACAAAATATGGTGATGAGGTTCACCATGCTTCTGACGCTGAAGGGCAGCAGCATGATCCTGAAGCCTGTCTGAAGGTTGCAGAGACTATTGAGACTGAGAGGTGTTTCCGGGGATGGTCATTATTACATTTGGCATGTCTTACTGACAGTGCACTGATGGTTGAGTTGTTGCTCCAATTTGGTGCTGATGTAAACATGTGTGATTATCATGGAAGAACTCCCTTGCACCATTGCATTACAAGTGGGAAAAATAAATTGGCAAAGTTTCTATTAAGAAGGGGTGCAAGGCCGTCAGTTAAAGATGCCGGAGGGCTCAGTATACTTGAAAGAGCAATGGAGATGGGAGCAATAACTGACGAAGAGCTATTTATCATGCTTGCTGAATGCTAG 2076 0.395 MNKEKQKLKCNTCVLMVEHVLVDRLTEFISIDLQDTKDSRRRFDKAVHSYDQSREKFVSLKKNTPEDVVAELEEDLQNSKSTFEKSRFNLVNSLMNIEAKKKYEFLESISAIMDAHLRYFKLGYDLLSQMEPYIHQVLTYAQQSKELANIEQDKLAKRIQEYRTQAELENIQVSSNFTETIPGSEGTHVVGLNSYRSLDSGMLSAPKGELQTVKQGYLLKRSSGSRGDWKRRFFVLDNQGNLYYYRVKGVKPTGSQAYNYGRSYEQNSGMFGRFRSKHNRAASLNDDILDCYTIDLCTSTIKMDAEDTDLRLCFRIISPSKTFTLQAENEAARMDWVNKITGAITSLFNSQFLQQPQYGRENSQKKNLPPIGASLSSQSEDGQKSLRDDLYSKEGGSVSKILRGIPGNDKCAECSASEPEWASLNLGILLCIECSGVHRNLGVHISKVRSITLDVRVWENTILELFDNLGNAYCNSIWEGLLLLDHERVGELHVPIKPCSTDAFQIKEKYIQAKYVEKSLIIREEDIPENPSVSIKIWQAVQAANVREVYRLIVTSTSNLINTKYGDEVHHASDAEGQQHDPEACLKVAETIETERCFRGWSLLHLACLTDSALMVELLLQFGADVNMCDYHGRTPLHHCITSGKNKLAKFLLRRGARPSVKDAGGLSILERAMEMGAITDEELFIMLAEC* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00465 691 CDD PH_ACAP 214 349 - -
Phac11g00465 691 Gene3D - 207 365 IPR011993 -
Phac11g00465 691 ProSiteProfiles ARF GTPase-activating proteins domain profile. 396 528 IPR001164 GO:0005096
Phac11g00465 691 ProSiteProfiles Ankyrin repeat region circular profile. 632 663 - -
Phac11g00465 691 Pfam PH domain 213 344 IPR001849 -
Phac11g00465 691 ProSiteProfiles Ankyrin repeat profile. 632 664 IPR002110 GO:0005515
Phac11g00465 691 SUPERFAMILY BAR/IMD domain-like 17 234 IPR027267 -
Phac11g00465 691 Gene3D Arfaptin homology (AH) domain/BAR domain 4 169 IPR027267 -
Phac11g00465 691 SMART PH_update 212 347 IPR001849 -
Phac11g00465 691 SUPERFAMILY Ankyrin repeat 540 686 IPR036770 -
Phac11g00465 691 ProSiteProfiles Ankyrin repeat profile. 599 631 IPR002110 GO:0005515
Phac11g00465 691 PRINTS HIV Rev interacting protein signature 427 444 IPR001164 GO:0005096
Phac11g00465 691 PRINTS HIV Rev interacting protein signature 408 427 IPR001164 GO:0005096
Phac11g00465 691 PRINTS HIV Rev interacting protein signature 450 471 IPR001164 GO:0005096
Phac11g00465 691 SMART ANK_2a 632 661 IPR002110 GO:0005515
Phac11g00465 691 SMART ANK_2a 599 628 IPR002110 GO:0005515
Phac11g00465 691 SUPERFAMILY ArfGap/RecO-like zinc finger 400 521 IPR037278 -
Phac11g00465 691 CDD ArfGap 400 515 - -
Phac11g00465 691 Pfam Ankyrin repeats (3 copies) 595 663 IPR002110 GO:0005515
Phac11g00465 691 MobiDBLite consensus disorder prediction 359 381 - -
Phac11g00465 691 Gene3D - 532 683 IPR036770 -
Phac11g00465 691 ProSiteProfiles PH domain profile. 211 345 IPR001849 -
Phac11g00465 691 Coils Coil 145 165 - -
Phac11g00465 691 PANTHER CENTAURIN/ARF 17 689 IPR045258 GO:0005096
Phac11g00465 691 Pfam Putative GTPase activating protein for Arf 400 520 IPR001164 GO:0005096
Phac11g00465 691 Pfam BAR domain of APPL family 17 146 IPR004148 GO:0005515|GO:0005737
Phac11g00465 691 SMART arf_gap_3 396 528 IPR001164 GO:0005096
Phac11g00465 691 MobiDBLite consensus disorder prediction 359 382 - -
Phac11g00465 691 ProSiteProfiles Ankyrin repeat region circular profile. 599 630 - -
Phac11g00465 691 Gene3D Arf GTPase activating protein 378 528 IPR038508 -
Phac11g00465 691 SUPERFAMILY PH domain-like 212 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00465 Phac-Chr11 3352033 3364414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00465 406 482 C2H2 Transcription Factor Family AT4G05330 50.000 1.90e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00465 K12489 - gmx:100796740 1196.42