Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00421 ATGATGGCAAATGATGGTGCAATGTGTGAAACTAAGTCTAGGTACGACGTTTTCCTTAGTTTTAGGGGTGAAGATACCCGTCACACATTCACTTGTCATCTCTATCATGCTTTGTGCCGGAAGGGAATTATCACCTTCATGGATGATGGGGAACTCAAGCTTGGAGATCAAATTCGTCCTTTACTTCATAGAGCCATTGAAGAATCAAATATCTCAATTGTTGTTTTATCAGAAAACTATGCAGATTCTTCTTGGTGTCTTGATGAACTTGTGAAGATCCTTGAATGCAAGGAGTCCAAAAACCAGCTCGTTTGGCCAATCTTCTACAAAGTGGATCCGTCAGATGTGAGACATCAGAATGGAAGTTATGGTGAGGCCATGATTAAGCATGAAAAAAGGTTTGGAAAAGACTCAGAGAAGGTGCTCAAATGGAGGTCAACCTTGAACGCCATAGCTGATATGACAGGAGAACATCTGAAATCTGAACAAGGGAGAGATGAATCCAAGTTTATTGATGATCTTGTTAGCAAGATTTTCCTGAAAGTGTCTCCTAAAGAATTGTCAAGTGATGAGAATATAGTAGGACGAGAGTATCGAGTTGAAGAACTGAAAACACTTCTGCATCTTAAGTCTGGTTATGTCACTTTCTTGGGGATTCATGGAACAGGTGGTATTGGCAAAACCACACTTGCCAAAGCTTTGTATGACTCCATTTACAAGCAGTTTGAGGGTTCATGTTTTCTTTCCAACGTTAGAGAAACTTCAAATCAAATTAAGGGTATAGAATTTCTGCAACAAAGGCTTCTATCAGAGATTCTTGAGGACAGCAAAATTCAGTTGGGAAGTAAAGAAGAAGGAACCAACACAATAAGACGTAGTGTAGCTTCAAAAAGAGTTCTTATAGTTCTGGACGATGTTGACAACGTTGAACAGTTGGAAAACTTGGCAGGGAGAAGATTTTGGTTTGGGGATGGGAGCAGAATCATTGTAACAACGAGAGATCAACATTTGCTTGAGGTTGGTCAGATCAACAACAGATATGAAGTGAAAGTGCTAAACAACCAAGAATCTCTGGAACTCTTCTGTCAAAGTGCATTTAGAAAGAGTTGTCCTGAAACAAACTATGAAGATCTGTCAAATCGTGCAATAAGCTGCTGCAAAGGCCTTCCACTGGCCTTAAAACTTGTAGGCTCTCATATGATTGGAAAAGATTTGGGTGGATGGAAAGATGCATTGGAAAGATATGAAAAGAGTCCACATCCAGATGTTCAAAAAATTCTTAGAATAAGCTATGATAGCTTGCCCTTCAATGAAAAAAATATTTTTCTTGACATTGCATGCTTCTTCAAAGGGCAAAGATCAGAATATGTAGAAAGAGTATTGGATGCGTGTGATTTCAACTCAGGAGATGGCATTCGTACATTAGTTAATAAATCTCTATTAACTGTTCACAGCCAAAACAAATGTTTGGAGATGCATGACCTGATACAAGACATGGGTAAAGAGATTGTTAAGGAGGAAGCGTGGAATGAAATTGGTGAACGCAGCAGATTATGGTTTCATGAAGATGTTCTTCAAGTACTTGCTGATAATATGGGAAGTAGGAAGATTCAAGGACTAATGCTTGACCCCCCTCAAAGAGAAGAAATTAATTGTACTGAGACTGTGTTTGAGAATATGAAGAATCTCAGAATTCTCATTGTTCGTAATACCAGCTTTTCACGTGAGCCTAGTTGTCTCCCAAATAACTTAAGGCTACTTGATTGGAAGGATTACCCTTCACAGTCCTTCCCATCAGGATTTTATCCCAGGAAAATTGGGGCATTCAATTTAAGTAGAAGTCCTTTACTCGTACTGGAAGAGCCATTTAAGAAATTTCAGCATTTGACTTATATGAATATCTCTTACTGTGATATGGTTACTGAATTTCCTGATGTGTCTGGGGCCAAGAATTTGAGAGAATTGAGACTTGATGGATGCAAGAAACTCGTTACCATTCATGAATCAGTTGGATTTCTAGCTAACCTTGTTTTCCTAAGTGCTTCAGAATGTACACTACTCACAAGTTTTGTGCCAAAAATCTATTTGCCTTCTTTGAAATACCTTTCCTTAAACCTCTGCACAAAACTAGCATTCTTTCCAGAAATTAGTGGAACGATGAACAACAAATTACAGATTAACATGGTGGACACAGCCATTAACATGCTTCCAGAATCCATTGAGAAACTTACTGGGCTTAACTATCTTGAGATGACAGATTGCAAGGAACTTCAACATTTACCAAGTAGCTTATTTATGTTGCCAGATTTTGTCACATTAAAAGTTGGAGGATGTCGTCGACTTCGAGAGTCATTTATAAGGTTCGAAGGAAGCCATTCAGTTTGCCCAAAACTAGAGACATTACATTTCGACAATGCTTATCTATCAGACAAAGATGTTCGTATGATTATTTACCATTTTCCTAACCTGAAAGACTTAAACATATCGTGCAACCCATTTATGTTTCTCCCAGCATGCATTAAACAATCTACTAAGTTGACAAGTCTTCACTTGAGGTATTGTCTTATGCTTCAAGAAATTCCAACACTGCCTTCAAGTGTTCAGAAAGTAGATGCAAAATACTGCTATTCCTTAACTTCGGAGTCATCAAAAATCTTATGGTCTCAGGTAAAGTATAGCACTACTTTTTACTGA 2694 0.382 MMANDGAMCETKSRYDVFLSFRGEDTRHTFTCHLYHALCRKGIITFMDDGELKLGDQIRPLLHRAIEESNISIVVLSENYADSSWCLDELVKILECKESKNQLVWPIFYKVDPSDVRHQNGSYGEAMIKHEKRFGKDSEKVLKWRSTLNAIADMTGEHLKSEQGRDESKFIDDLVSKIFLKVSPKELSSDENIVGREYRVEELKTLLHLKSGYVTFLGIHGTGGIGKTTLAKALYDSIYKQFEGSCFLSNVRETSNQIKGIEFLQQRLLSEILEDSKIQLGSKEEGTNTIRRSVASKRVLIVLDDVDNVEQLENLAGRRFWFGDGSRIIVTTRDQHLLEVGQINNRYEVKVLNNQESLELFCQSAFRKSCPETNYEDLSNRAISCCKGLPLALKLVGSHMIGKDLGGWKDALERYEKSPHPDVQKILRISYDSLPFNEKNIFLDIACFFKGQRSEYVERVLDACDFNSGDGIRTLVNKSLLTVHSQNKCLEMHDLIQDMGKEIVKEEAWNEIGERSRLWFHEDVLQVLADNMGSRKIQGLMLDPPQREEINCTETVFENMKNLRILIVRNTSFSREPSCLPNNLRLLDWKDYPSQSFPSGFYPRKIGAFNLSRSPLLVLEEPFKKFQHLTYMNISYCDMVTEFPDVSGAKNLRELRLDGCKKLVTIHESVGFLANLVFLSASECTLLTSFVPKIYLPSLKYLSLNLCTKLAFFPEISGTMNNKLQINMVDTAINMLPESIEKLTGLNYLEMTDCKELQHLPSSLFMLPDFVTLKVGGCRRLRESFIRFEGSHSVCPKLETLHFDNAYLSDKDVRMIIYHFPNLKDLNISCNPFMFLPACIKQSTKLTSLHLRYCLMLQEIPTLPSSVQKVDAKYCYSLTSESSKILWSQVKYSTTFY* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00421 897 Pfam NB-ARC domain 196 433 IPR002182 GO:0043531
Phac11g00421 897 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 445 IPR027417 -
Phac11g00421 897 SMART till_3 14 154 IPR000157 GO:0007165
Phac11g00421 897 Gene3D - 351 430 IPR042197 -
Phac11g00421 897 PRINTS Disease resistance protein signature 694 710 - -
Phac11g00421 897 PRINTS Disease resistance protein signature 293 307 - -
Phac11g00421 897 PRINTS Disease resistance protein signature 216 231 - -
Phac11g00421 897 PRINTS Disease resistance protein signature 386 400 - -
Phac11g00421 897 Gene3D Ribonuclease Inhibitor 714 889 IPR032675 -
Phac11g00421 897 ProSiteProfiles TIR domain profile. 13 178 IPR000157 GO:0007165
Phac11g00421 897 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 156 IPR035897 -
Phac11g00421 897 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 792 IPR044974 GO:0006952
Phac11g00421 897 Gene3D - 12 185 IPR035897 -
Phac11g00421 897 SUPERFAMILY L domain-like 492 875 - -
Phac11g00421 897 Gene3D - 431 502 IPR036388 -
Phac11g00421 897 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 183 - -
Phac11g00421 897 Pfam TIR domain 15 188 IPR000157 GO:0007165
Phac11g00421 897 Gene3D - 186 346 IPR027417 -
Phac11g00421 897 Gene3D Ribonuclease Inhibitor 546 713 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00421 Phac-Chr11 3076559 3081154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00421 15 778 WRKY Transcription Factor Family AT4G12020 32.225 2.60e-98 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00421 - - gmx:100801890 1245.72