Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00394 ATGGGGCGTGAGGACGTAGACGTGAAGAAATTTTCACGGCAACTGATTGAGTGTTACTATTCGAGGATGACGCTGGATTTTCTCACGAACAAGAAGCTTCTAGAACAAAAAGCTTCTAGAACAAGAAACCCTAAACAAAATCAGCGGCATCACCCAGATCCGGCTAAGTGGTGGTGGATCTGTGAAGAACTTGTGGTGAATCTCACTTTCCATTCCAACGGGCGTGAAGGATAG 234 0.4573 MGREDVDVKKFSRQLIECYYSRMTLDFLTNKKLLEQKASRTRNPKQNQRHHPDPAKWWWICEELVVNLTFHSNGREG* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00394 77 Gene3D - 1 49 IPR036401 GO:0003735|GO:0005840|GO:0006412
Phac11g00394 77 Pfam Ribosomal S17 7 38 IPR001210 GO:0003735|GO:0005840|GO:0006412
Phac11g00394 77 SUPERFAMILY Rps17e-like 7 40 IPR036401 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00394 Phac-Chr11 2809828 2810686 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00394 8 38 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 77.419 4.74e-10 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00394 K02962 - gmx:100527036 49.6766