Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00380 ATGAACCTGTCTTCGATGGCATTTACACTCTTGACACTTGCACTCTGGACCCTTTTTATTTCTCTTATCATAAAGAGTGTCGTTCAAGTCGAGACAGAGGAAGAGGAGAGCGATTTAGTAAAATATTTGCCAGGACAACCAGCAGTGAAATTCAATCACTACGCTGGTTATATTAAATTGAGACCAGAAAAAGAGAAAGCACTATTTTACTGGTTTTTTGAAGCTGAAGATGATCCATCACGTAAACCTATTGTACTTTGGCTTAATGGAGGACCTGGTTGCTCCTCAATTGCCTTTGGGGCAGCACAAGAGATTGGTCCATTTTTGGTAGATCAGGAAGAAAATCTAAAATTTAACAAATTTTCTTGGAATAAAGTTGCAAACATCATATTTTTGGATTCACCCATTGGTGTTGGCTTTTCTTATACAAATAATTCCAAGGACTTAAGCGAGCTTGGTGATCAAGTTTCCGCTTCTGATAACTATGATTTTCTGGTTGGTTGGTTCAAAAGATTTCCAAACTTTAGATCCAACGAATTTTATATTGTAGGAGAGAGTTATGGAGGACATTATGCTCCACAACTTGCTGACCTTATATATAAAAGAAATAAAAGAGGTTCATATATCAATTTGAAGGGAGTCATGATGGGAAATGCTGTGATAAATAAGATCACAGATGAAAAAGGGATATACGATTATGCCTGGAGCCATGGAATAATCTCAACACAAGTCTTGGATGGAATAAAGAGGCACTGTAATTTCAGTGAAAAGGAACGCACCAAAGAATGCAAAGTTTTTAGGACGAAGTTTTTAGAATGTTATACGGGTATTAACATTATGGATATTTACTCACCGGTGTGTCTCAAAGACATAGATTATAAAAGACCAAATTCAACAAGACTTCCACATGCTCTTTGGAATACATTACCATCATCAGGATACGATTATTGTCCTGATGATCATGTAACAAAGTATTTCAACAAGAAGAATGTTCAGAGGGCAATCCATGCAAATATAACGAACTTGTCTTATCCATTTGAAGTTTGCAGTATATTTGAGAAATGGAATGACTCTCCAGAGACAGTGTTGCCACTAATTCAGAAGTTATTAAGTGTTGGTTTACGTATTTGGATGTACAGTGGAGACACTGATGGGAGAGTTCCGATATTATCAACCAAATATAGCTTGGAAGAGTTGAAACTGAATATAACGAAAGAGTGGAGAGCTTGGTTTGTAGGGACAGAAGTGGGAGGGTGGGTGGAGGAGTACGAAGGTGGTCTTACTTTTGCCTCCGTTAGAGGTGCTGGCCACCAAGTTCCAGTTTCTGCACCACAACGAGCACTTTCTCTCTTCTCCCATTTCCTCTCTTCTCAACCTCTTCCATCTTCACCCTTCTAG 1398 0.3834 MNLSSMAFTLLTLALWTLFISLIIKSVVQVETEEEESDLVKYLPGQPAVKFNHYAGYIKLRPEKEKALFYWFFEAEDDPSRKPIVLWLNGGPGCSSIAFGAAQEIGPFLVDQEENLKFNKFSWNKVANIIFLDSPIGVGFSYTNNSKDLSELGDQVSASDNYDFLVGWFKRFPNFRSNEFYIVGESYGGHYAPQLADLIYKRNKRGSYINLKGVMMGNAVINKITDEKGIYDYAWSHGIISTQVLDGIKRHCNFSEKERTKECKVFRTKFLECYTGINIMDIYSPVCLKDIDYKRPNSTRLPHALWNTLPSSGYDYCPDDHVTKYFNKKNVQRAIHANITNLSYPFEVCSIFEKWNDSPETVLPLIQKLLSVGLRIWMYSGDTDGRVPILSTKYSLEELKLNITKEWRAWFVGTEVGGWVEEYEGGLTFASVRGAGHQVPVSAPQRALSLFSHFLSSQPLPSSPF* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00380 465 Gene3D - 317 351 - -
Phac11g00380 465 FunFam Carboxypeptidase 34 289 - -
Phac11g00380 465 FunFam Carboxypeptidase 362 457 - -
Phac11g00380 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Phac11g00380 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Phac11g00380 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Phac11g00380 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Phac11g00380 465 ProSitePatterns Serine carboxypeptidases, serine active site. 182 189 IPR018202 GO:0004185
Phac11g00380 465 Pfam Serine carboxypeptidase 45 456 IPR001563 GO:0004185|GO:0006508
Phac11g00380 465 SUPERFAMILY alpha/beta-Hydrolases 36 461 IPR029058 -
Phac11g00380 465 Gene3D - 362 456 - -
Phac11g00380 465 ProSitePatterns Serine carboxypeptidases, histidine active site. 427 444 IPR033124 GO:0004185
Phac11g00380 465 Gene3D alpha/beta hydrolase 34 289 IPR029058 -
Phac11g00380 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 444 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00380 Phac-Chr11 2501011 2504560 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00380 373 460 Calmodulin-binding Proteins AT2G22960 32.955 5.32e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00380 K16297 - gmx:100799746 615.535