Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00361 ATGGATTGTACAGCTGCAAGAAAGACACAAAAGGCTGACCGAGAAAAGCTGAGGAGAGATCGACTCAATGAGCAATTTGTAGTGCTGGGCAACATTTTAGATCCTGATAGGCCCAAAAATGACAAAGCAACCATTATAGGTGATACCATTCAATTGCTGCAGGACCTTACTTCTCAATTGGCTCGTGAGAAAAATGATCTTAGAGAAGAGAAGGCTTCTCTTAAGTCGGATATTGAGAAGTTGAATTGTCAGTATCAGCAACAGCTCAGGACTGTGTCTCCATGGACTGCAATGGATCATTCAGTAATGGTAGCTCCACCATCATATCCATATCCAGTGCCAATGCCAATACCTCCTGCTCCAATTACTATGCAGCCATACCCCTTCTATGCTAATCAACATTCTGCTATTATCCCTAACCCTTGTTCATCATATGTTCCTTATTTAGTCCCTAATACTCTTGTTGAACAGCAATCCATCCAACACATAGCCCCACCTCTTCATCCAGGTTTTCAGTCCCACATGTCGGGTAAACAAGAGTCCAGAAACAAATCCAAGGAGAGCATGGTTGAAAAACATGAGGATTCAAATGATGTCACTGCAGACCAGACTCCCGAGTCTTCTTCAGACCAGGACTTGTCATCTGGACAAAGAAAATCTAGCGAGTTGCCAAGGAAGCAAAGCAGTTGCAATGAAGCGAGTTCGATAGGTTGGTGTTCTTCATCTAGTAGCGTTCAGGAGAGTTCATCAAGTAGTGTAGTTCACGAGCACAAAGGTTAA 780 0.4321 MDCTAARKTQKADREKLRRDRLNEQFVVLGNILDPDRPKNDKATIIGDTIQLLQDLTSQLAREKNDLREEKASLKSDIEKLNCQYQQQLRTVSPWTAMDHSVMVAPPSYPYPVPMPIPPAPITMQPYPFYANQHSAIIPNPCSSYVPYLVPNTLVEQQSIQHIAPPLHPGFQSHMSGKQESRNKSKESMVEKHEDSNDVTADQTPESSSDQDLSSGQRKSSELPRKQSSCNEASSIGWCSSSSSVQESSSSSVVHEHKG* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00361 259 Coils Coil 5 25 - -
Phac11g00361 259 Coils Coil 50 91 - -
Phac11g00361 259 SMART finulus 12 62 IPR011598 GO:0046983
Phac11g00361 259 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 65 IPR036638 GO:0046983
Phac11g00361 259 Gene3D - 2 70 IPR036638 GO:0046983
Phac11g00361 259 PANTHER TRANSCRIPTION FACTOR BHLH121 2 257 IPR044579 GO:0003700|GO:0006879
Phac11g00361 259 MobiDBLite consensus disorder prediction 201 252 - -
Phac11g00361 259 MobiDBLite consensus disorder prediction 165 259 - -
Phac11g00361 259 MobiDBLite consensus disorder prediction 179 200 - -
Phac11g00361 259 Pfam Helix-loop-helix DNA-binding domain 7 56 IPR011598 GO:0046983
Phac11g00361 259 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 56 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00361 Phac-Chr11 2230053 2235584 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00361 1 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 55.230 8.44e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac11g00361 HLH 5.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00361 - - gmx:100817000 355.14