Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00355 ATGTGGAGGGCAGCTTTAACAGAATTAACAGCAACTGCATCTCTAATGTTCACCTTGACAACTTCCATTGTTGCATGCTTGGACTCACAGGAGGTGGATCCTAAGCTCCTTGTTCCCTTTGCAGTTTTCATCATAGCCTTTCTGTTCCTTCTTGTGACAGTTCCTCTCTCTGGGGGCCACATGAGTCCCGTTTTCACATTCATTGGTGCTTTGAAGGGCGTTGTGACTCTCACCCGTGCTCTCATTTACGTCTTGGCACAATGCATTGGCTCAATAATTGGTTTCTTCATACTAAAGTGCGTCATAGACCCCAAATTAGCCTACACATATTCCTTGGGAGGTTGTGCCATTGATGGGCAAAGAGTGAGTTTTGGCATTAAGGCACAGAATGCTTTGCTAGTGGAATTCGCATGCACATTTGTGGTACTCTTTGTGGGAGTCACATTGGCATTTGACAAGAAAAGGTCTAGGGAGTTGGGCTTGCCAATGGTGTGTTTGGTGGTGGCAGGAGCCATGGCATTGGCAGTGTTTGTCTCCATAACTGTAACTGGGCAGCCCGGATATGCTGGTGTGGGCCTCAACCCAGCAAGATGCTTAGGCCCAGCATTGCTTCATGGAGGATCACTTTGGCACGGGCATTGGGTTTTCTGGCTTGGGCCTTTCTTAGCCTGCATGCTGTATTATGTTGTGTCTATCAACCTGCCAAAGGAGGATTTGGTTTGGGTAGAGGGAGAACATGATGTGTTAAACTTGGCTCTAGCTTCATGCTTCAATGTTTATGATACTTCCTTTTCAAAGGATCTGCCAGAAGAACGCAGTGCAGGGTTCCAACTCCAAGTATGA 843 0.4698 MWRAALTELTATASLMFTLTTSIVACLDSQEVDPKLLVPFAVFIIAFLFLLVTVPLSGGHMSPVFTFIGALKGVVTLTRALIYVLAQCIGSIIGFFILKCVIDPKLAYTYSLGGCAIDGQRVSFGIKAQNALLVEFACTFVVLFVGVTLAFDKKRSRELGLPMVCLVVAGAMALAVFVSITVTGQPGYAGVGLNPARCLGPALLHGGSLWHGHWVFWLGPFLACMLYYVVSINLPKEDLVWVEGEHDVLNLALASCFNVYDTSFSKDLPEERSAGFQLQV* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00355 280 Gene3D Glycerol uptake facilitator protein. 1 238 IPR023271 -
Phac11g00355 280 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Phac11g00355 280 Pfam Major intrinsic protein 2 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g00355 280 PANTHER AQUAPORIN-LIKE 1 255 - -
Phac11g00355 280 SUPERFAMILY Aquaporin-like 2 229 IPR023271 -
Phac11g00355 280 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g00355 280 PRINTS Major intrinsic protein family signature 175 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g00355 280 PRINTS Major intrinsic protein family signature 42 66 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g00355 280 PRINTS Major intrinsic protein family signature 3 22 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g00355 280 PRINTS Major intrinsic protein family signature 134 152 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g00355 280 PRINTS Major intrinsic protein family signature 79 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00355 Phac-Chr11 2211868 2212782 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00355 2 233 Major Intrinsic Protein MIP AT3G61430 31.148 4.83e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00355 K09866 - gmx:100804160 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00355 11 2211868 2212782 Phac11g00355 11 2211868 2212782 ECH