Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00343 ATGATTTCTTCAAAAAAGATCATCCAAATGGCTTGGAAGTGGCAGAAGGAGGCCACAAATTACCAGAGGAAGAGAATTCTGTGGCCAAAGACTCAAGAAAATGCAGCAAAAGCAGAAGGTTGCAGCGTGTGGACGAAGGCTGAAAAGGGTCACTTTGTTGTGTACAGCATGGATCAGAAACGCTTTGTGCTTCCCTTACTGTATTTGAAAAACAACATTTTCAGAGAGCTTTTCAAGATGGCAGAAGAAGAGTTTGGTCTTTCTAGCAACGTGCCCTTAACGCTGCCTTGTGAAGGGACGTTAATAGAGTACGTGATAACGTTGATCGAGAGAAACATAACTAAGGATCTGGAAGAAGCTGTGTTGATGTTCATACCTACCAGTCGATGCCATTCTTCATTTGATCTTCATCGTGAACCAACCAATCAACATTTGCTTTGCAGCTACTGA 450 0.4244 MISSKKIIQMAWKWQKEATNYQRKRILWPKTQENAAKAEGCSVWTKAEKGHFVVYSMDQKRFVLPLLYLKNNIFRELFKMAEEEFGLSSNVPLTLPCEGTLIEYVITLIERNITKDLEEAVLMFIPTSRCHSSFDLHREPTNQHLLCSY* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00343 149 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 142 IPR003676 GO:0009733
Phac11g00343 149 Pfam Auxin responsive protein 6 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00343 Phac-Chr11 2157538 2158250 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00343 49 117 Calmodulin-binding Proteins AT5G20810 40.000 8.41e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00343 - - gmx:100803097 223.787