Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00340 ATGGCCACCATGGAAGACATGAGCATGAGTTCTGAAATTGCACTTCCTGGCTTCCGATTCCATCCGACAGAGGAAGAGCTTCTGGATTTCTATCTCAAGAACATGGTTGTTGGCAAGAAACTCCGGTACGACGTTATTGGTTTCCTCAACATCTATCACCACGATCCCTGGGACTTACCTGGTTTGGCTAAGGTTGGGGAGAGAGAATGGTACTTCTTCGTGCCGAGGGACAAGAAGCATGGAAGCGGGGGAAGGCCGAACCGGACCACCGAAAAAGGATTTTGGAAAGCCACCGGTTCGGACCGGAAAATAGTGACTTTGTCGGATCCCAAACGCATAATCGGGTTAAGGAAAACCCTGGTTTTCTACATGGGAAGAGCTCCCAGTGGACGCAAAACCGATTGGGTCATGAACGAGTACCGTCTACCAGACAATTGCAAATTACCCAAGGAAATAGTGTTGTGCAAGATATATAGAAAGGCAACATCGTTGAAAGTGCTGGAGGAAAGGGCAGAGAGAGAGATGAAGCAAATGGTGGGTTCCCCTGCTTCTCCTCCTTCTTCCACGGACACCATGTCCTTTAGCAGCCCTCAGGAAGACCAAAACGTGGCCTTGCCACTGCCCTTGTTGCAGAATGTTCTGAAGAAAGAGTCTGAATCTGAAGAAATGGCACCATGTGTGTCCAACATGACAGTGCCTAAACAAGAAAAAGGAAGCAACCAATTGGGTTTGAAGGACAACAACAAGGGCAGTTGTGGGACATCATCCCTACAAATGCCCTTTGGGAAGGACAATCTTCCTGATCTGCAGCTTCCCATGCTAACAGATTGGACCCAAGATACCTTTTGGGCTCAGTTGAACAGTCCATGGCTCCAAAACTTTACTCCTTCCAACATCTTAAACTTCTACTGA 912 0.4792 MATMEDMSMSSEIALPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYMGRAPSGRKTDWVMNEYRLPDNCKLPKEIVLCKIYRKATSLKVLEERAEREMKQMVGSPASPPSSTDTMSFSSPQEDQNVALPLPLLQNVLKKESESEEMAPCVSNMTVPKQEKGSNQLGLKDNNKGSCGTSSLQMPFGKDNLPDLQLPMLTDWTQDTFWAQLNSPWLQNFTPSNILNFY* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00340 303 MobiDBLite consensus disorder prediction 181 198 - -
Phac11g00340 303 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Phac11g00340 303 ProSiteProfiles NAC domain profile. 14 160 IPR003441 GO:0003677|GO:0006355
Phac11g00340 303 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 220 - -
Phac11g00340 303 MobiDBLite consensus disorder prediction 176 198 - -
Phac11g00340 303 Gene3D NAC domain 23 164 IPR036093 GO:0003677|GO:0006355
Phac11g00340 303 FunFam NAC domain-containing protein 67-like 23 164 - -
Phac11g00340 303 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00340 Phac-Chr11 2126934 2129608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00340 9 303 NAC Transcription Factor Family AT2G17040 58.923 9.25e-118 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac11g00340 NAM 8.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00340 - - gmx:732555 530.791