Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00339 ATGCTTCAAAGCTTGGTCCCGCGATCCCCCCGCACTTCCAACACTAGCGACATGAAAACTAAGCGCACCGTTGATACCGCTGATTCCCCCGCCGATCAACCTTCTTTCAAGCGGACCAACTTCGCCGCCGATACAGCCACCGAGGAAGACCAGGCCTTCGATCCACAACCTCACATCGGTGAGTCCACTGGCCTCAAACTCCTCGGCCTCCTCCTCCAATGCGCAGAGTGCGTCGCCATGGATAAACTCGACTTCGCCAACGACCTGCTCCCGGAGATCGCCGAGCTCTCCTCGCCGTTCGGGACCTCGCCGGAGCGCGTCGGAGCGTACTTCGCGCAGGCGCTGCAGGCGCGTGTGGTGAGCTCCTGCCTCGGCTCCTACTCTCCTCTGACCGCGAAATCGGTAACCCTAACTCAGTCGCAGCGAATCTTCAACGCCTTCCAATCCTACAACTCCGTCTCGCCGCTGGTGAAGTTCTCTCACTTCACCGCGAACCAGGCTATCTACCAGGCCCTGGAAGGCGAGGATCGCGTCCATATCATCGACCTCGATATCATGCAGGGTCTCCAATGGCCAGGACTGTTCCACATCCTCGCTTCTCGCTCGAAGAAGATTCGCTCCATGAGAATAACCGGATTCGGATCCTCCTCTGAGCTCCTGGACTCCACCGGCCGGAGGCTCGCGGATTTCGCGAGCTCGCTCGGGCTCCCGTTCGAGTTTCACCCGGTGGAGGGGAAAATTGGAAGCGTGACGGAACTGAGTCAACTCGGCGTTCGAGCTAACGAGGCGATCGTGGTGCACTGGATGCATCATTGCTTGTATGACATAACCGGGAGCGATTTAGGGACGTTGAGATTGCTGACTCAGCTTAGGCCGAAACTGATCACGACCGTGGAGCAGGACTTGAGCCACGCCGGGAGCTTCCTTGCGCGGTTCGTGGAGGCCTTGCATTATTACAGCGCGTTGTTCGACGCGCTCGGGGATGGTTTAGGTGCGGACAGCCTTGAGAGGCACACGGTGGAGCAGCAGCTCTTGGGCTGCGAGATCAGGAACATCGTGGCCGTGGGCGGGCCCAAGAGGACCGGAGAGGTCAAGTTGGAGCGGTGGGCGGATGAGTTGAAACGGGCCGGGTTTCGGGCCGTTTCCCTCCGGGGCAACCCTGCTGCTCAAGCCAGTTTGTTGCTTGGAATGTTCCCTTGGAGAGGTTATACTCTGGTTGAAGAGAATGGTTCCTTGAAGCTTGGTTGGAAGGACCTCTCTCTCTTGATTGCCTCTGCTTGGCAACCCTCTGATTCCATTACTTACCCTGATTGA 1314 0.5837 MLQSLVPRSPRTSNTSDMKTKRTVDTADSPADQPSFKRTNFAADTATEEDQAFDPQPHIGESTGLKLLGLLLQCAECVAMDKLDFANDLLPEIAELSSPFGTSPERVGAYFAQALQARVVSSCLGSYSPLTAKSVTLTQSQRIFNAFQSYNSVSPLVKFSHFTANQAIYQALEGEDRVHIIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSSELLDSTGRRLADFASSLGLPFEFHPVEGKIGSVTELSQLGVRANEAIVVHWMHHCLYDITGSDLGTLRLLTQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGADSLERHTVEQQLLGCEIRNIVAVGGPKRTGEVKLERWADELKRAGFRAVSLRGNPAAQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLIASAWQPSDSITYPD* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00339 437 MobiDBLite consensus disorder prediction 1 37 - -
Phac11g00339 437 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 51 423 IPR005202 -
Phac11g00339 437 MobiDBLite consensus disorder prediction 1 20 - -
Phac11g00339 437 ProSiteProfiles GRAS family profile. 58 428 IPR005202 -
Phac11g00339 437 Pfam GRAS domain family 69 428 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00339 Phac-Chr11 2117474 2120636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00339 18 431 GRAS Transcription Factor Family AT5G41920 66.271 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac11g00339 GRAS 7.3e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00339 - - pvu:PHAVU_011G024600g 822.002