Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00330 ATGATGTCACTTTCACCTAGCTTAGGTTCTCCCAACAATCTCTTGCTTAGAGAAATGAAATCCGAGGAAAGGGGTTTGTACTTGATCCATTTGCTGCTCACCTGTGCAAATCACGTAGCTGCTGGTAATCTTGAAAATGCAAACACCACACTCGAGCAAATTTCCCTGCTTGCTTCCCCTGATGGGGATACTATGCAGCGAATCGCTGCTTATTTTATGGAATCACTTGCAGATCGGATTCTGAAAACATGGCCTGGGATCCACAGAGCCCTCAACTCAACTAGAGTGACTATGCTATCTGAAGAAATTCTTGTTCAGAAGCTCTTCTTCGAGCTTTTCCCTTTCTTAAAGGTGGCATATGTTCTCACAAATCAGGCCATCATTGAGGCCATGGAGGGGGAGAAAGTGATTCATGTAATTGATCTCAATGCTGCTGAAGCTGCTCAGTGGATTGCTCTCCTCCAAGTTTTGAGTGCGCGTCCCGAAGGCCCTCCTCATTTGAGAATCACAGGGATTCATCAGAAAAAGGAGATTCTGGATCAGGTAGCTCATAGACTAACTGAAGAAGCAGAAAAGTTGGATATACCATTCCAATTCAACCCTGTGGTCAGCAAACTAGAAAATCTTGATTTTGATAAACTTCGTGTGAAAACTGGGGAGGCACTAGCAATAAGTTCCATACTCCAATTACATACCCTTTTGGCCTGGGATGATGAAGCCTTAAAGAGAAAATCTCCTCGTCTGTTAAAAGGCTCAAGCGGAATTCACCTGCAAAGAGTCCTGCCACTGAGCCAAAGCACATTGGGTGATATGCTTGAGAAAGATATGGTCAATGGCTACACCGCAAGTCCTGACTCAACCTCCTCATCACCAGCATCTTTAACTACTTCCAATTCAATGAATATGGAGAGCTTTCTCAGTGCCTTATGGGGTTTATCACCAAAGGTCATGGTTGTGACAGAGCAAGACTGTAACCATAATGGTCCAACTCTGATGGATAGGCTACTTGAAGCACTGTATTCTTATGCAGCATTGTTTGATTGTTTGGAATCCACTGTCTCTAGAACATCATTGGAGAGATTAAGGGTGGAGAAGATGATTTTTGGGGAGGAAATAAAGAACATCATTGCGTGTGAGGGGCCTGAAAGAAAGGAGAGACATGAAAAGCTTGAGAAGTGGTTCCAGAGATTTGATCAAGCTGGGTTCGGTAATGTGCCTTTGAGCTACTATGGTATGTTGCAAGCAAGGAGGTTCATCCAGAGCTATGGTTGTGAAGGATACAGAATGAGGGATGAAAATGGCTGTGTACTAATTTGCTGGCAGGATCGGCCAATGTTTTCAATATCAGCTTGGAGATCTAGGAAGTAA 1368 0.4371 MMSLSPSLGSPNNLLLREMKSEERGLYLIHLLLTCANHVAAGNLENANTTLEQISLLASPDGDTMQRIAAYFMESLADRILKTWPGIHRALNSTRVTMLSEEILVQKLFFELFPFLKVAYVLTNQAIIEAMEGEKVIHVIDLNAAEAAQWIALLQVLSARPEGPPHLRITGIHQKKEILDQVAHRLTEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSILQLHTLLAWDDEALKRKSPRLLKGSSGIHLQRVLPLSQSTLGDMLEKDMVNGYTASPDSTSSSPASLTTSNSMNMESFLSALWGLSPKVMVVTEQDCNHNGPTLMDRLLEALYSYAALFDCLESTVSRTSLERLRVEKMIFGEEIKNIIACEGPERKERHEKLEKWFQRFDQAGFGNVPLSYYGMLQARRFIQSYGCEGYRMRDENGCVLICWQDRPMFSISAWRSRK* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00330 455 ProSiteProfiles GRAS family profile. 19 452 IPR005202 -
Phac11g00330 455 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 24 451 IPR005202 -
Phac11g00330 455 Pfam GRAS domain family 28 452 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00330 Phac-Chr11 2010309 2013637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00330 16 455 GRAS Transcription Factor Family AT1G50420 66.742 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac11g00330 GRAS 5.1e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00330 - - gmx:100814131 838.95