Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00280 ATGAAATGGTGTGATGTGATTTGCAGAGGAGAAGAGGGAATGGCTTACATGTGTGCAGACAGTGGGAACCTCATGGCCATTGCGCAGCAAGTCATCAAGCAGAAGCAGCAGCAAGAGCAGCAGCAGCAGAAACAGCACCAGCACCAGCAGAAACACCACCACCAGCACCACCCACACCACCACCACCACCACCACCAACACCATCTCAACCCTCTCTCTCTCCATCCAATTCCATGGAACAACACTCCCAACCTCGGCTACCCTCTCCATCCCACCGACTTCCCCGACCCCTTCCAACCCGATCCGCCATTCCACTTCCCGGACCCCCAATCCGCCCCCGCACCCTTCCGCTTCTCCGATTTCGACTCCGACGACTGGATGGACTCCCTCATCGCCGCCGCCGACACCCCCTCCTGGCACACCAATGCCGATTTCCCCTTCCCCTCCGATCTCAACCGCCTCATCTTCCCCTCCTCCGACACTTCCACCGCCGCCGCCGCCGCCGCCTCGCTCCCCCTCCATCCAACCCCTCCCCCGCCGGCGCAGGAGCCAGTCACCGCCGGCGTCTCCGAGCCTGAGTCCGCTCACCCGCTCCTCAAAGCCCTAACCGAGTGCGCCTCCTTCGCGGAAAGCGAACCGGATCAGGCCGCGGAATCCCTAGCGCGCCTGAGAAAATCTGTATCCCAGCACGGTAACCCCACTCAGCGTGTGGGCTTCTACTTCTGCGAAGCCCTCTCCCGTAAAATATGGGCCGAGAAAGAGAAGGTGGAGCCCACCAGCACCAGCACGACCACGACCACCTCGGAGGAGCTAACACTGTCTTACAAGGCCATGAACGATGCCTGCCCTTACTCCAAGTTCGCACACTTAACCGCCAACCAAGCCATCCTCGAAGCCACCGACGGCGCCGCCAACATCCACATCCTCGACTTCGGCATCGTCCAAGGGATTCAGTGGGCCGCGCTCTTGCAGGCTTTCGCCACTCGCTCTTCCGGGAAGCCCAACAAGATCAAAATCTCCGGGATTCCCGCCATCGCTCTCGGGGCCTCTCCCGGCCCGTCTCTCTCCGCCACCGGAAACCGCCTCTCCGAGTTCGCCAAACTCCTCGACCTGAACTTCGAGTTCACGCCTATTCTCACTCCCATTCACCACCTCGACCACAACAGCTTTTGCATTGACCCCAACGAGGCTCTGGCTGTGAACTTCATGCTCCAGCTGTATAACCTCCTCGACGAGCCTCCAACCGCCGTTGACACCGCCCTCCGGTTGGCCAAATCTCTCAACCCCAAAATCGTCACCCTCGGCGAGTACGAAGCAAGCCTCACGCGTGTCGGCTTTCTCAACCGCTTCAAGACCGCGTTCAACTACTTCTCTGCTGTGTTTGAATCGCTGGACCCTAACTTGCCCGCTGACTCGCCGGAGAGGTTTCAGGTGGAGAGTCTTCTCCTGGGACGGCGAATCGACGCGGTGATTGGGCCTGGGCCCGTGAGGGAGAGCATGGAGGACAGGGAGCAGTGGAGGGTTCTGATGGAGCGTGCTGGGTTTGAGTCTGTGAGTCTGAGTCATTATGCAGTTAGTCAGGCGAAGATACTTCTCTGGAATTACGGTTACAGTTCTCTGTTTTCGCTGCTTGAATCCACGCCGCCGGGTTTCTTGTCTCTTGCTTGGAAAGATGTTCCTCTCTTGACTCTCTCCTCATGGCGTTAA 1707 0.5917 MKWCDVICRGEEGMAYMCADSGNLMAIAQQVIKQKQQQEQQQQKQHQHQQKHHHQHHPHHHHHHHQHHLNPLSLHPIPWNNTPNLGYPLHPTDFPDPFQPDPPFHFPDPQSAPAPFRFSDFDSDDWMDSLIAAADTPSWHTNADFPFPSDLNRLIFPSSDTSTAAAAAASLPLHPTPPPPAQEPVTAGVSEPESAHPLLKALTECASFAESEPDQAAESLARLRKSVSQHGNPTQRVGFYFCEALSRKIWAEKEKVEPTSTSTTTTTSEELTLSYKAMNDACPYSKFAHLTANQAILEATDGAANIHILDFGIVQGIQWAALLQAFATRSSGKPNKIKISGIPAIALGASPGPSLSATGNRLSEFAKLLDLNFEFTPILTPIHHLDHNSFCIDPNEALAVNFMLQLYNLLDEPPTAVDTALRLAKSLNPKIVTLGEYEASLTRVGFLNRFKTAFNYFSAVFESLDPNLPADSPERFQVESLLLGRRIDAVIGPGPVRESMEDREQWRVLMERAGFESVSLSHYAVSQAKILLWNYGYSSLFSLLESTPPGFLSLAWKDVPLLTLSSWR* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00280 568 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 164 562 IPR005202 -
Phac11g00280 568 MobiDBLite consensus disorder prediction 31 77 - -
Phac11g00280 568 Coils Coil 25 45 - -
Phac11g00280 568 ProSiteProfiles GRAS family profile. 189 568 IPR005202 -
Phac11g00280 568 MobiDBLite consensus disorder prediction 47 70 - -
Phac11g00280 568 MobiDBLite consensus disorder prediction 166 194 - -
Phac11g00280 568 Pfam GRAS domain family 199 568 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00280 Phac-Chr11 1652733 1654439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00280 14 568 GRAS Transcription Factor Family AT5G66770 55.921 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac11g00280 GRAS 3.9e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00280 - - vum:124844288 900.968