Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00253 ATGAGAGATATTTGTCGAAACTTCCAGCGAGGCAGCTGTCAATATGGAGAAAGGTGTAGATATTCACACGTCAACCAACAGAGAAAGCCTAACGTTCAAGGGTTTGGCGGACAAAACGGTTCTCACCAACAGCAAAGTACAAATCCCTTCGGATTTGGGTCTGGTTCTGGTTCACAACAACAACAGAAGTCTAATTCTTTTGGTTTTGGCGCGCAGAACAGCTCCCAGTTAAACGGGGGGCCTCGTCCTGAGTATAAACCGAACCAATACAAGCCTTTTGAAAACAAATGGAATCGACAATCGTCCAAACCCCAGAATGGTGTGAAATCTGATAGCAACCCCCAACCAGTTGATCATAAATGCACAGATCCTGACAACTGCAAGCGCCAGATTGCAGAAGATTTTGAGAAAGAGAAACCAATTTGGATACTTACATGCTACAGTCATTGCAAAGGTGCTCCATGTGACATTGTTGGTGATATTAGCTATGAAGAATTGCGAGCATCAGCTTATGAGGATGCAAAGCGTGGGATGAGCTTACAATCAATAGTTGAGAAAGAGAGAAATATACTGAAATCCAAGATGCTTGAGTTTGAGAAACTACTTTCTGAACCTTACCAAAAACCAGTAAGTTCTTCTCTTGACAGTCAAAGACCCCAATCCATCGGAGCCAATGCAAATCTGTTTTCAGGAACTTCTCAAAGTAATGGTCCTTTGTCAGTCTCAAGCTTTAGCCAACTTGGTACTTCAATGAATATGGGTTTTGGAAGGCTAGTTGGATATCAGTTTTTAAGGGCACTAGAAGTACCTAGGTCTTCAAAATTTGGTTCCTGTAAATTTCCTACAGTGGCTGTGTGGTTACATAGGCATTACTTGTGGAATTGGGTGATTCAAAGAATGGATTGTGGTAGGCCATCTGCACCACCAACAAACACTCTGGCACAGCCTAGTTTCTTTGGAATTGGAGTAACCAATGGCACCTTCGGTGTTCAAAGCAACCCCCATTCTACACAAGTGGATTTGACAATGTTTCCGGGTTCAACTCAGCCAACATCAACCACATTCAATAACTCTGGTCCCAATACAATGTTTCAAACAACATCGGATGTCCAGCTGTCAAACAAGTTACAAGCGGAGAATGTGTCAGGAGATGTCAGTATTTGGTTAAAAGATAAATGGAATCCGGGAGAGATCCCAGAAGAAGCTCCTCCTGATTCATTGGTACGGTAG 1230 0.4276 MRDICRNFQRGSCQYGERCRYSHVNQQRKPNVQGFGGQNGSHQQQSTNPFGFGSGSGSQQQQKSNSFGFGAQNSSQLNGGPRPEYKPNQYKPFENKWNRQSSKPQNGVKSDSNPQPVDHKCTDPDNCKRQIAEDFEKEKPIWILTCYSHCKGAPCDIVGDISYEELRASAYEDAKRGMSLQSIVEKERNILKSKMLEFEKLLSEPYQKPVSSSLDSQRPQSIGANANLFSGTSQSNGPLSVSSFSQLGTSMNMGFGRLVGYQFLRALEVPRSSKFGSCKFPTVAVWLHRHYLWNWVIQRMDCGRPSAPPTNTLAQPSFFGIGVTNGTFGVQSNPHSTQVDLTMFPGSTQPTSTTFNNSGPNTMFQTTSDVQLSNKLQAENVSGDVSIWLKDKWNPGEIPEEAPPDSLVR* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00253 409 Pfam CCCH-type zinc finger 4 23 IPR041367 -
Phac11g00253 409 ProSiteProfiles Zinc finger C3H1-type profile. 4 26 IPR000571 GO:0046872
Phac11g00253 409 MobiDBLite consensus disorder prediction 30 125 - -
Phac11g00253 409 Gene3D - 1 64 - -
Phac11g00253 409 PANTHER NUCLEOPORIN-LIKE PROTEIN 2 4 408 - -
Phac11g00253 409 SMART c3hfinal6 1 25 IPR000571 GO:0046872
Phac11g00253 409 MobiDBLite consensus disorder prediction 93 115 - -
Phac11g00253 409 MobiDBLite consensus disorder prediction 30 82 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phac11g00253 zf-CCCH_4 4.8e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00253 K14321 - gmx:100814339 545.814