Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00244 ATGTCAACAACCTCGCAGGTTATTACATGCAAAGCTGCAATATGCTGGGGATTAGGACAACCTGTTACAGTGGAAGAGATTCAAGTTGATCCACCAAAAGCAACTGAAGTTCGAGTTAAGGTGCTCTGTGCAAGTATCTGCCACACAGACCTAACAAGCCTTCAAGGATTCCCACATATGAGTTTTCCTCTAGCACTTGGACATGAAGGAGTTGGTGTTGTAGAGAGTGTTGGAGATGAAGTGACAACCCTTAAAGAGGGGGATGTAGTGATCCCAGTATACATAGGGGAGTGTGAAACATGTGAGAATTGTGTTTCTGGGAAAACAAATTTATGTCTAACACACCCTGTGAGGTTGAATGGTTTGCTACCAGACAACACTTCAAGGATGTCCATAAGAGGACAGAGGTTATACCATGTTTTAAGCTGTGCTACATGGTCAGAATACTTTGTTAGTGATGTGAATTACACTGTCAAAGTTGATCCAGCCATTGATCCAGCACATGCAAGTTTCATCTCATGTGGGTTTTCAACTGGGTTTGGAGCAGCTTGGAAAGAAGCCAAGGTTGAAAGTGGATCCAGTGTAGCTGTTCTTGGTCTTGGGGCTGTTGGATTAGGGGCTATAAGTGGAGCCAAAAGTATGGGAGCAAGTAAGATAATTGGAATTGACAAAAATGAGAAGAAGAGGGAAAAAGGAGAGGCTTTTGGAATGACCCAGTTCATAAATCCTGGTGATTCTGCTAAATCTATTTCAGAATTGGTTAAGGAAGTAACTGGTGGAATGGGTGTGGATTATTCCTTTGAGTGCACTGGAATTCCCCCTCTGCTTTCTCAATCATTGGAAGCCACAAAAATGGGAACGGGTAAAACAATAGTTGTTGGAATACCAGCAGAACCTGTTCTGTCCTTGGGTGTGCTACCCCTTCTTCTTGGTAGAACTATGAAAGGTTCAGCTTTTGGAGGTATAAAAGTTAGAACTGATATTGCCATAGTAGCTAACAAATGCTTAAAAAAGGAATTCCCTCTTGAAGAACTATCCACTCATGTGGTCCCATTAGAAGATATTAGCAAAGGATTTGAGATATTGAAAGATCCCAACTGTGTGAAAGTTGTGATCAAGATATCTCATTGA 1131 0.4164 MSTTSQVITCKAAICWGLGQPVTVEEIQVDPPKATEVRVKVLCASICHTDLTSLQGFPHMSFPLALGHEGVGVVESVGDEVTTLKEGDVVIPVYIGECETCENCVSGKTNLCLTHPVRLNGLLPDNTSRMSIRGQRLYHVLSCATWSEYFVSDVNYTVKVDPAIDPAHASFISCGFSTGFGAAWKEAKVESGSSVAVLGLGAVGLGAISGAKSMGASKIIGIDKNEKKREKGEAFGMTQFINPGDSAKSISELVKEVTGGMGVDYSFECTGIPPLLSQSLEATKMGTGKTIVVGIPAEPVLSLGVLPLLLGRTMKGSAFGGIKVRTDIAIVANKCLKKEFPLEELSTHVVPLEDISKGFEILKDPNCVKVVIKISH* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00244 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Phac11g00244 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 335 IPR036291 -
Phac11g00244 376 CDD liver_alcohol_DH_like 8 373 - -
Phac11g00244 376 Gene3D - 14 369 - -
Phac11g00244 376 PANTHER ALCOHOL DEHYDROGENASE 6 365 - -
Phac11g00244 376 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 317 - -
Phac11g00244 376 SMART PKS_ER_names_mod 17 372 IPR020843 GO:0016491
Phac11g00244 376 Pfam Alcohol dehydrogenase GroES-like domain 35 158 IPR013154 -
Phac11g00244 376 Pfam Zinc-binding dehydrogenase 202 321 IPR013149 -
Phac11g00244 376 Gene3D - 179 317 - -
Phac11g00244 376 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
Phac11g00244 376 SUPERFAMILY GroES-like 3 190 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00244 Phac-Chr11 1488140 1491611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00244 35 323 Monolignol Biosynthesis Gene Families AT2G21730 30.034 2.31e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00244 K00121 - gmx:100798341 587.8