Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00243 ATGATTCAGAAAGCTGATATGAGACTCGAATCAGGGACTTGTAATGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTCTCATGGGGTCAAAGACCAAAGAATTCTCTGATGAAAACTCTCGCTTAGGGGAAGCTAATCAGTATTGTACTGTTGAGGCTGATGGGTCTTCTTCTCCTGGGAGCAGAGCTTGTGAAAGATTGAAGAAGCATCCTGTCAATGAAAGCAGTCACAAGCCTAGTATTTCTTCAACTCATGATTCTCAGTATGAAAATGTTGAGAATGGACAAGCCTTATCTGGGAAGTATCAGGATTCTAAGTGTTTAGAAAGTCTTGACGATATCACTTCTTGTATCAGTAGGACCAGTAATGCTAATTTAGCGAGTGGTAGCCAACAAATAAATACAGACAGAATAAATGTATCTTGTAGTTCGACTTTAGTTAGTCACTTAGAGGCAGAAGGACCTAGAAACGGGCCATCTGTTGACATGTCTGGTTTGTCAGAAGGCTGTATGGAAAATGTAGATTCATCATTTACCAAAGAGAGAGTACGTATTATATCTGCTGGTGAAAAACCTGTGGCAGATAAGGAGAACCTAAATAATGGTACAGCCAAAGTTTCAGTGGAAATATGTCCGAAGTCAGAAGCAGATATGGGAAATAATGTTGACATTGCTATAGCTGAAGATCATAAATATTCAGTCCATGATGGACTGCATGCGAAGGTTGATAAGCTGATTAAATCATCTGGCAGGTCTGAACCTCTATCAGAAGATGAGGGTCATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAAGATCTACTTGCCATATGTAGTAGGTGTAGTGATGGTGCAGAGCACACCTACTGCATGCGGGAAATGCTTGTCAAACTCCCTGAAGGTGATTGGTTGTGTGAAGAATGCAAGTGTGCAGAGGAGACGGCAAATCGAAGGCTAGCTTCACAAATTTCTGGCAAAAGACCTTCTCAAAGCATGGAAATAGCTACAGCAGCAAAAAGGCAAGCTCTTGAATCAAGCACAGGATCACCGAAGGCATCAAGCCCAAAGAGAATAGTCTCACTGTCACGGGAATCTTCTCTCAAGAGCATGGATAAAGGAAAGATGAAATCTGGGCAACAGGTCCCCGTGCGGAACCACCTTGGTGGGGATGATGTAGACCTTGCACGTTCTCTTTCGACTGGCCCTCGGTGTCAAAATCCAAGGAGTACGTTGTTAAAGTCCAATTCATTCAACAACTTCAATTCCAAGCCTAGAATCAAACTTGTTGATGAAGTTGTTCCCCAAAAGCAGAAAGGGGGTGTCGAACATATTTCTAAGAATCTTGAGACACCTGCTGGGATGATAAGCAAATCAATGTCATTTAAATCCTCACACTTGGGGCGGTCAAATACTAATGAATCAAAAGTTAAATCTAGTTTTTCTAAACCTGGAATTGTTCAGGATTTGAAAGCATTAAGACATACAAAAGAACTGGGTTCACTTGACAAGAAATTTCAACCTAAGATTGATCGACCTGTCATTCATTCAACCATGGTTAGTTCTGTTTCCACATCAAAAGGTGATCATAAGCTTGCTCCTCTTGGTGAAACTGCTAAACCTTATACAGTTAACAACAATCGAGAGTTTAAGGTCAACCAAGATGGAAAAGTATATTCATTATCAAAGTCTATGAATAATACAGGCAGTAGAAGTCCAGAATCTCAAGTTAGTTCAGATAAAACATCAACCAGTGTCAATGAAACTCAACAGGATAGGCTGCCTCGATCACAGGAAACTGTTAATCATGTTGACAGAACAAAGGATAGTTCTAGTGATCATGTCAGGTCAGGTGTTACTAATGCTTCAAAAAGTTCATTCTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGCTCGATTAGTGGTACCCAAGAATTTGTTGCCGAAGCATCAGTCACTGCTACAAGTAGTTCAAAAGAGGAGATGCATAAGGGAAATAGATTGAAAGCTGCAATCCAGGCAGCTTTGCTCAGGAGGCCTGAAATACACAAGAAGAAAGAAGGTCCTGATGAAAGTAATGAGTTTCCTACATCAAGCACTGGTTTCAAACGTGAAGTCATTTCTCAAAACCAAGTGTTGGTTTCCAGCACATTAAAGAGTAGCATATATGCTGAAGAAATGAATGTGAAGCAGGAAATTGTTGAGAGTTCTTCATTTGAAACCTCTAAATGTCCATCTGCTAATGATCCGAAGCAACTTAAATTTTGCCAAACTGATATTTGCTCTCAGCTGAAAAAGTTGGATTTTGTTGGTCTTACTTCTGGAGAGCCTGTAGTGAGAGACTTGGCCAATAATGGCATGGTGCTCTCAAGTGTTCTTTCAAAGATGTCAGTCATTCCGGAGTATGAGTACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCTGACTTGTATGCTGGAATTCAGGCACATTTATCTGCATGTGCTTCTCCTAAGGTTATTGAGACAGTAAGGAAATTTTCACCTGAAGTTTCCCTAAATGAAGTTTCTCGATTGAGCATATGGCCTTCACAATTTCATCAAAGTGGTGCTAAGGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACACTGAAAGTTACGAGAGACACTACAAGGGTCTGTTGGATCACATGATTAGAAATGATTTGGCACTTAGGGGAATGTTTGGTGGCGTTGAACTTCTCATATTTGCATCCAATCAGCTTCCGGAAGACTCACAGCGTTGGAATATGTTATTTTTCCTATGGGGTACATTTAGAGGGAGGAGGATAAATCATTCAGATTCCACAAAAAGTAAATGTATTCCTAGTTTGAATGTGATGCCAAATGAGAAGGATTTCCCGTCTGCTGTCATGACTTTGTCTGAAACTTGGTGTTCACCAAAACGTGTCAATGAAGAGTCCATTGACCAAGGTAACAATATGGCATGTAGGAATTTTGATAGTAAAGGAACTGTGTTTGGCCAGACATATTTGGAGTTGCAAGTAAAGTTAGAGAGACCAGATTCTAGTGTCAACACCAAATCTACATCAGGGATTCTGACCACCAGTTCTCAATTGTGTCAAGAAATGAATTCTACTGGTTCATCCCTGGGAGATAGTGCACCAGAGCATCGACAATGCATACAGTCTAAACCTCCTGAAGTAATGGAAACTAGTGTAAGTAGAAGGATTGTGGAAACAAAAACTAATCCTGATATTTCTGGTAAGCGAGAGCCCTCTTTGTCTTCGGAGATCCCTTCTGTCGAATTCCAAATAGATACTGCAAGTAATATCATTAAGGATAAAATTTTGGAGAGAACAGTATATGATGAGAATCAGCGAAGGCCTAAAAGGAAACAGTTGGAAAATGATCTCAATATTAACGAGGAGGCAACGCTTCAGGGAGACCTGGATTTGAAAGGGGCCAACTGTCAGGTACCTAATGATAAAAAAATTAAGCATATAGATCTATCAGATACACTTGTGGAGGCTTCTGCAGTTAGTTCTCAGAAACGTCCTTTGAATGTGGTAAATGGCAAATTGGAAGACACAGAAAGTAGCAAGAAGCTGCAAAAAAGTTTGGGTGGAGTTTTTGAATGCAACGAATCTGCTGGAGCCAGGGTCTCTTTCAATGGTAGTTTTGCATCCCTTGTGAACGATCTTGGTTCCTGTTCTTCGGTGGGCAAAGGGTGCAAAGAAGCTTGCGATGAGAAAATCATCCACGAGGACTTGGGAACGATGGAAAGAACCTTTTTTCCTGTTGATAATCGCAATAAAGTTGACTCGGGGATGGTGGTGAACAGGGAGTCACTGAATGGGGCTGGTGAGTACGTGGACCAATTTGAAGTTGGGATTCCAAATTTGGAGCTTGCTTTGGGGGGTGAAACAAAACCGTCACACAAGGGTATGCTGCCATTCTTTGTTGGTGCAGTTGACAAGAAAATTAACCCGGAAAAGACTCCAGATATTGAGCGAGACGATGAGAACGTTGCTGCATCTCTTTCCTTGTCACTATCCTTTCCATCTTCAAGCAAAGAACACATGAAACCAGTTACAAAAAATGAGCCTTTGCCCACCGATGGGCATAACGCCAAGTCGTCGTTTCTTCTTTTTGGGAGATTCACCGACAAATAA 4218 0.4109 MIQKADMRLESGTCNVCSAPCSSCMHLNRALMGSKTKEFSDENSRLGEANQYCTVEADGSSSPGSRACERLKKHPVNESSHKPSISSTHDSQYENVENGQALSGKYQDSKCLESLDDITSCISRTSNANLASGSQQINTDRINVSCSSTLVSHLEAEGPRNGPSVDMSGLSEGCMENVDSSFTKERVRIISAGEKPVADKENLNNGTAKVSVEICPKSEADMGNNVDIAIAEDHKYSVHDGLHAKVDKLIKSSGRSEPLSEDEGHESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLVKLPEGDWLCEECKCAEETANRRLASQISGKRPSQSMEIATAAKRQALESSTGSPKASSPKRIVSLSRESSLKSMDKGKMKSGQQVPVRNHLGGDDVDLARSLSTGPRCQNPRSTLLKSNSFNNFNSKPRIKLVDEVVPQKQKGGVEHISKNLETPAGMISKSMSFKSSHLGRSNTNESKVKSSFSKPGIVQDLKALRHTKELGSLDKKFQPKIDRPVIHSTMVSSVSTSKGDHKLAPLGETAKPYTVNNNREFKVNQDGKVYSLSKSMNNTGSRSPESQVSSDKTSTSVNETQQDRLPRSQETVNHVDRTKDSSSDHVRSGVTNASKSSFCRKCKDFGHATECCSISGTQEFVAEASVTATSSSKEEMHKGNRLKAAIQAALLRRPEIHKKKEGPDESNEFPTSSTGFKREVISQNQVLVSSTLKSSIYAEEMNVKQEIVESSSFETSKCPSANDPKQLKFCQTDICSQLKKLDFVGLTSGEPVVRDLANNGMVLSSVLSKMSVIPEYEYIWQGVFEVHRNGKPPDLYAGIQAHLSACASPKVIETVRKFSPEVSLNEVSRLSIWPSQFHQSGAKEDNIALYFFAKDTESYERHYKGLLDHMIRNDLALRGMFGGVELLIFASNQLPEDSQRWNMLFFLWGTFRGRRINHSDSTKSKCIPSLNVMPNEKDFPSAVMTLSETWCSPKRVNEESIDQGNNMACRNFDSKGTVFGQTYLELQVKLERPDSSVNTKSTSGILTTSSQLCQEMNSTGSSLGDSAPEHRQCIQSKPPEVMETSVSRRIVETKTNPDISGKREPSLSSEIPSVEFQIDTASNIIKDKILERTVYDENQRRPKRKQLENDLNINEEATLQGDLDLKGANCQVPNDKKIKHIDLSDTLVEASAVSSQKRPLNVVNGKLEDTESSKKLQKSLGGVFECNESAGARVSFNGSFASLVNDLGSCSSVGKGCKEACDEKIIHEDLGTMERTFFPVDNRNKVDSGMVVNRESLNGAGEYVDQFEVGIPNLELALGGETKPSHKGMLPFFVGAVDKKINPEKTPDIERDDENVAASLSLSLSFPSSSKEHMKPVTKNEPLPTDGHNAKSSFLLFGRFTDK* 1406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00243 1405 MobiDBLite consensus disorder prediction 353 400 - -
Phac11g00243 1405 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 208 336 IPR013083 -
Phac11g00243 1405 MobiDBLite consensus disorder prediction 559 632 - -
Phac11g00243 1405 MobiDBLite consensus disorder prediction 611 626 - -
Phac11g00243 1405 SMART PHD_3 276 323 IPR001965 -
Phac11g00243 1405 MobiDBLite consensus disorder prediction 353 380 - -
Phac11g00243 1405 MobiDBLite consensus disorder prediction 559 610 - -
Phac11g00243 1405 PANTHER - 274 979 - -
Phac11g00243 1405 MobiDBLite consensus disorder prediction 55 93 - -
Phac11g00243 1405 MobiDBLite consensus disorder prediction 1364 1392 - -
Phac11g00243 1405 MobiDBLite consensus disorder prediction 696 717 - -
Phac11g00243 1405 SUPERFAMILY FYVE/PHD zinc finger 265 327 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00243 Phac-Chr11 1469693 1480553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00243 273 335 C2H2 Transcription Factor Family AT3G01460 36.508 1.44e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00243 - - vun:114169861 2342