Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00239 ATGATTCAGAAAGCTGATATGAGACTCGAATCAGGGACTTGTAATGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTCTCATGGGGTCAAAGACCAAAGAATTCTCTGATGAAAACTCTCGCTTAGGGGAAGCTAATCAGTATTGTACTGTTGAGGCTGATGGGTCTTCTTCTCCTGGGAGCAGAGCTTGTGAAAGATTGAAGAAGCATCCTGTCAATGAAAGCAGTCACAAGCCTAGTATTTCTTCAACTCATGATTCTCAGTATGAAAATGTTGAGAATGGACAAGCCTTATCTGGGAAGTATCAGGATTCTAAGTGTTTAGAAAGTCTTGACGATATCACTTCTTGTATCAGTAGGACCAGTAATGCTAATTTAGCGAGTGGTAGCCAACAAATAAATACAGACAGAATAAATGTATCTTGTAGTTCGACTTTAGTTAGTCACTTAGAGGCAGAAGGACCTAGAAACGGGCCATCTGTTGACATGTCTGGTTTGTCAGAAGGCTGTATGGAAAATGTAGATTCATCATTTACCAAAGAGAGAGTACGTATTATATCTGCTGGTGAAAAACCTGTGGCAGATAAGGAGAACCTAAATAATGGTACAGCCAAAGTTTCAGTGGAAATATGTCCGAAGTCAGAAGCAGATATGGGAAATAATGTTGACATTGCTATAGCTGAAGATCATAAATATTCAGTCCATGATGGACTGCATGCGAAGGTTGATAAGCTGATTAAATCATCTGGCAGGTCTGAACCTCTATCAGAAGATGAGGGTCATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAAGATCTACTTGCCATATGTAGTAGGTGTAGTGATGGTGCAGAGCACACCTACTGCATGCGGGAAATGCTTGTCAAACTCCCTGAAGGTGATTGGTTGTGTGAAGAATGCAAGTGTGCAGAGGAGACGGCAAATCGAAGGCTAGTTATTGAAGAAAAAAAACTTCATAAAGTTATTTCAGCTTCACAAATTTCTGGCAAAAGACCTTCTCAAAGCATGGAAATAGCTACAGCAGCAAAAAGGCAAGCTCTTGAATCAAGCACAGGATCACCGAAGGCATCAAGCCCAAAGAGAATAGTCTCACTGTCACGGGAATCTTCTCTCAAGAGCATGGATAAAGGAAAGATGAAATCTGGGCAACAGGTCCCCGTGCGGAACCACCTTGGTGGGGATGATGTAGACCTTGCACGTTCTCTTTCGACTGGCCCTCGGTGTCAAAATCCAAGGAGTACGTTGTTAAAGTCCAATTCATTCAACAACTTCAATTCCAAGCCTAGAATCAAACTTGTTGATGAAGTTGTTCCCCAAAAGCAGAAAGGGGGTGTCGAACATATTTCTAAGAATCTTGAGACACCTGCTGGGATGATAAGCAAATCAATGTCATTTAAATCCTCACACTTGGGGCGGTCAAATACTAATGAATCAAAAGTTAAATCTAGTTTTTCTAAACCTGGAATTGTTCAGGATTTGAAAGCATTAAGACATACAAAAGAACTGGGTTCACTTGACAAGAAATTTCAACCTAAGATTGATCGACCTGTCATTCATTCAACCATGGTTAGTTCTGTTTCCACATCAAAAGGTGATCATAAGCTTGCTCCTCTTGGTGAAACTGCTAAACCTTATACAGTTAACAACAATCGAGAGTTTAAGGTCAACCAAGATGGAAAAGTATATTCATTATCAAAGTCTATGAATAATACAGGCAGTAGAAGTCCAGAATCTCAAGTTAGTTCAGATAAAACATCAACCAGTGTCAATGAAACTCAACAGGATAGGCTGCCTCGATCACAGGAAACTGTTAATCATGTTGACAGAACAAAGGATAGTTCTAGTGATCATGTCAGGTCAGGTGTTACTAATGCTTCAAAAAGTTCATTCTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGCTCGATTAGTGGTACCCAAGAATTTGTTGCCGAAGCATCAGTCACTGCTACAAGTAGTTCAAAAGAGGAGATGCATAAGGGAAATAGATTGAAAGCTGCAATCCAGGCAGCTTTGCTCAGGAGGCCTGAAATACACAAGAAGAAAGAAGGTCCTGATGAAAGTAATGAGTTTCCTACATCAAGCACTGGTTTCAAACGTGAAGTCATTTCTCAAAACCAAGTGTTGGTTTCCAGCACATTAAAGAGTAGCATATATGCTGAAGAAATGAATGTGAAGCAGGAAATTGTTGAGAGTTCTTCATTTGAAACCTCTAAATGTCCATCTGCTAATGATCCGAAGCAACTTAAATTTTGCCAAACTGATATTTGCTCTCAGCTGAAAAAGTTGGATTTTGTTGGTCTTACTTCTGGAGAGCCTGTAGTGAGAGACTTGGCCAATAATGGCATGGTGCTCTCAAGTGTTCTTTCAAAGATGTCAGTCATTCCGGAGTATGAGTACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCTGACTTGTATGCTGGAATTCAGGCACATTTATCTGCATGTGCTTCTCCTAAGGTTATTGAGACAGTAAGGAAATTTTCACCTGAAGTTTCCCTAAATGAAGTTTCTCGATTGAGCATATGGCCTTCACAATTTCATCAAAGTGGTGCTAAGGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACACTGAAAGTTACGAGAGACACTACAAGGGTCTGTTGGATCACATGATTAGAAATGATTTGGCACTTAGGGGAATGTTTGGTGGCGTTGAACTTCTCATATTTGCATCCAATCAGCTTCCGGAAGACTCACAGCGTTGGAATATGTTATTTTTCCTATGGGGTACATTTAGAGGGAGGAGGATAAATCATTCAGATTCCACAAAAAGTAAATGTATTCCTAGTTTGAATGTGATGCCAAATGAGAAGGATTTCCCGTCTGCTGTCATGACTTTGTCTGAAACTTGGTGTTCACCAAAACGTGTCAATGAAGAGTCCATTGACCAAGGTAACAATATGGCATGTAGGAATTTTGATAGTAAAGGAACTGTGTTTGGCCAGACATATTTGGAGTTGCAAGTAAAGTTAGAGAGACCAGATTCTAGTGTCAACACCAAATCTACATCAGGGATTCTGACCACCAGTTCTCAATTGTGTCAAGAAATGAATTCTACTGGTTCATCCCTGGGAGATAGTGCACCAGAGCATCGACAATGCATACAGTCTAAACCTCCTGAAGTAATGGAAACTAGTGTAAGTAGAAGGATTGTGGAAACAAAAACTAATCCTGATATTTCTGGTAAGCGAGAGCCCTCTTTGTCTTCGGAGATCCCTTCTGTCGAATTCCAAATAGATACTGCAAGTAATATCATTAAGGATAAAATTTTGGAGAGAACAGTATATGATGAGAATCAGCGAAGGCCTAAAAGGAAACAGTTGGAAAATGATCTCAATATTAACGAGGAGGCAACGCTTCAGGGAGACCTGGATTTGAAAGGGGCCAACTGTCAGGTACCTAATGATAAAAAAATTAAGCATATAGATCTATCAGATACACTTGTGGAGGCTTCTGCAGTTAGTTCTCAGAAACGTCCTTTGAATGTGGTAAATGGCAAATTGGAAGACACAGAAAGTAGCAAGAAGCTGCAAAAAAGTTTGGGTGGAGTTTTTGAATGCAACGAATCTGCTGGAGCCAGGGTCTCTTTCAATGGTAGTTTTGCATCCCTTGTGAACGATCTTGGTTCCTGTTCTTCGGTGGGCAAAGGGTGCAAAGAAGCTTGCGATGAGAAAATCATCCACGAGGACTTGGGAACGATGGAAAGAACCTTTTTTCCTGTTGATAATCGCAATAAAGTTGACTCGGGGATGGTGGTGAACAGGGAGTCACTGAATGGGGCTGGTGAGTACGTGGACCAATTTGAAGTTGGGATTCCAAATTTGGAGCTTGCTTTGGGGGGTGAAACAAAACCGTCACACAAGGGTATGCTGCCATTCTTTGTTGGTGCAGTTGACAAGAAAATTAACCCGGAAAAGACTCCAGATATTGAGCGAGACGATGAGAACGTTGCTGCATCTCTTTCCTTGTCACTATCCTTTCCATCTTCAAGCAAAGAACACATGAAACCAGTTACAAAAAATGAGCCTTTGCCCACCGATGGGCATAACGCCAAGTCGTCGTTTCTTCTTTTTGGGAGATTCACCGACAAATAA 4254 0.409 MIQKADMRLESGTCNVCSAPCSSCMHLNRALMGSKTKEFSDENSRLGEANQYCTVEADGSSSPGSRACERLKKHPVNESSHKPSISSTHDSQYENVENGQALSGKYQDSKCLESLDDITSCISRTSNANLASGSQQINTDRINVSCSSTLVSHLEAEGPRNGPSVDMSGLSEGCMENVDSSFTKERVRIISAGEKPVADKENLNNGTAKVSVEICPKSEADMGNNVDIAIAEDHKYSVHDGLHAKVDKLIKSSGRSEPLSEDEGHESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLVKLPEGDWLCEECKCAEETANRRLVIEEKKLHKVISASQISGKRPSQSMEIATAAKRQALESSTGSPKASSPKRIVSLSRESSLKSMDKGKMKSGQQVPVRNHLGGDDVDLARSLSTGPRCQNPRSTLLKSNSFNNFNSKPRIKLVDEVVPQKQKGGVEHISKNLETPAGMISKSMSFKSSHLGRSNTNESKVKSSFSKPGIVQDLKALRHTKELGSLDKKFQPKIDRPVIHSTMVSSVSTSKGDHKLAPLGETAKPYTVNNNREFKVNQDGKVYSLSKSMNNTGSRSPESQVSSDKTSTSVNETQQDRLPRSQETVNHVDRTKDSSSDHVRSGVTNASKSSFCRKCKDFGHATECCSISGTQEFVAEASVTATSSSKEEMHKGNRLKAAIQAALLRRPEIHKKKEGPDESNEFPTSSTGFKREVISQNQVLVSSTLKSSIYAEEMNVKQEIVESSSFETSKCPSANDPKQLKFCQTDICSQLKKLDFVGLTSGEPVVRDLANNGMVLSSVLSKMSVIPEYEYIWQGVFEVHRNGKPPDLYAGIQAHLSACASPKVIETVRKFSPEVSLNEVSRLSIWPSQFHQSGAKEDNIALYFFAKDTESYERHYKGLLDHMIRNDLALRGMFGGVELLIFASNQLPEDSQRWNMLFFLWGTFRGRRINHSDSTKSKCIPSLNVMPNEKDFPSAVMTLSETWCSPKRVNEESIDQGNNMACRNFDSKGTVFGQTYLELQVKLERPDSSVNTKSTSGILTTSSQLCQEMNSTGSSLGDSAPEHRQCIQSKPPEVMETSVSRRIVETKTNPDISGKREPSLSSEIPSVEFQIDTASNIIKDKILERTVYDENQRRPKRKQLENDLNINEEATLQGDLDLKGANCQVPNDKKIKHIDLSDTLVEASAVSSQKRPLNVVNGKLEDTESSKKLQKSLGGVFECNESAGARVSFNGSFASLVNDLGSCSSVGKGCKEACDEKIIHEDLGTMERTFFPVDNRNKVDSGMVVNRESLNGAGEYVDQFEVGIPNLELALGGETKPSHKGMLPFFVGAVDKKINPEKTPDIERDDENVAASLSLSLSFPSSSKEHMKPVTKNEPLPTDGHNAKSSFLLFGRFTDK* 1418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00239 1417 PANTHER - 274 989 - -
Phac11g00239 1417 MobiDBLite consensus disorder prediction 349 412 - -
Phac11g00239 1417 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 208 335 IPR013083 -
Phac11g00239 1417 SMART PHD_3 276 323 IPR001965 -
Phac11g00239 1417 MobiDBLite consensus disorder prediction 623 638 - -
Phac11g00239 1417 MobiDBLite consensus disorder prediction 349 392 - -
Phac11g00239 1417 MobiDBLite consensus disorder prediction 571 622 - -
Phac11g00239 1417 MobiDBLite consensus disorder prediction 55 93 - -
Phac11g00239 1417 MobiDBLite consensus disorder prediction 1376 1404 - -
Phac11g00239 1417 SUPERFAMILY FYVE/PHD zinc finger 265 328 IPR011011 -
Phac11g00239 1417 MobiDBLite consensus disorder prediction 571 644 - -
Phac11g00239 1417 MobiDBLite consensus disorder prediction 708 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00239 Phac-Chr11 1469693 1480553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00239 273 360 C2H2 Transcription Factor Family AT3G01460 32.955 2.91e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00239 - - vun:114169861 2370.89